PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PON89035.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
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Family | YABBY | ||||||||
Protein Properties | Length: 195aa MW: 22001.9 Da PI: 8.5948 | ||||||||
Description | YABBY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | YABBY | 220.4 | 5.2e-68 | 6 | 167 | 3 | 170 |
YABBY 3 vfssseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakasqllaaeshldeslkeelleelkveeenlksnvekeesastsvssekl 101 v+ ++eq+Cy+ CnfCn +lavsvP +slf +vtvrCGhCt+l svn+a a q l+ +++ + + ++ ++ ++n + + + s+s+ + ++kl PON89035.1 6 VDVAPEQLCYIPCNFCNIVLAVSVPCSSLFDIVTVRCGHCTNLWSVNMAAAFQSLSWQQD--H----HHVQA-QNFNHNAPDYRIDSGSSSRCNINTKL 97 67899********************************************99999998875..1....22222.22233333444444444444444444 PP YABBY 102 .senedeevprvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahfPkihfgl 170 + + ++++ v+rPPekrqrvPsayn+fikeeiqrika+nPdishreafs+aaknWahfP+ihfgl PON89035.1 98 aMRAPTTNITEERAVNRPPEKRQRVPSAYNQFIKEEIQRIKANNPDISHREAFSTAAKNWAHFPHIHFGL 167 23455666777778******************************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 195 aa Download sequence |
MSSCSVDVAP EQLCYIPCNF CNIVLAVSVP CSSLFDIVTV RCGHCTNLWS VNMAAAFQSL 60 SWQQDHHHVQ AQNFNHNAPD YRIDSGSSSR CNINTKLAMR APTTNITEER AVNRPPEKRQ 120 RVPSAYNQFI KEEIQRIKAN NPDISHREAF STAAKNWAHF PHIHFGLMLK TNNQTKLDNG 180 SEKHLMPSRA ALLNK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G26580.1 | 1e-87 | YABBY family protein |