PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON88767.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

SBP

Protein Properties

Length: 1031aa MW: 113633 Da PI: 6.4441

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON88767.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	132.1	1.8e-41	172	249	1	78
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 +Cqve+C adls ak+yhrrhkvCe+hska ++lv +++qrfCqqCsrfh l+efDe+krsCrrrLa+hn+rrrk+++ PON88767.1 172 ICQVEDCGADLSAAKDYHRRHKVCEMHSKAGKALVGNVMQRFCQQCSRFHVLQEFDEGKRSCRRRLAGHNKRRRKTNP 249 5**************************************************************************976 PP

Sequence ? help Back to Top
Protein Sequence Length: 1031 aa Download sequence
MEARFGGEAH AHAHPHPHPH PHPHPHHHPH FYGVTSADLS TVGKRTMEWD LNQWKWDPDL 60 FLATSVNPVV VPSDTMAMGR QFFPIGSTAI PDTGGSSNTS SSCSEEGDPA IDKGKRELEK 120 RRRANGVDDH NLNDEAATLT LKLGGSDREM ANWEGNSGKK TKLVGSTSNR AICQVEDCGA 180 DLSAAKDYHR RHKVCEMHSK AGKALVGNVM QRFCQQCSRF HVLQEFDEGK RSCRRRLAGH 240 NKRRRKTNPE TVANGTSLTD DQTSGYLLIS LLRILSNMHS NKSDQTTDQD LLSHLLKSLA 300 SQTSDHGGKG VAALLQEPQN LLNDGTSVGN SEAVSTFLSN GSQGPPRPIK QNHAISISEI 360 PEQGVHLHNA NGGSIQATSS VKPSVLNSPP SYSEARDSTA GQNKMNNFDL NDIYIDSDDG 420 TEDPERSSPP TNLVTSSLDC PSWVQQDSHQ SSPPQTSGNS DSASAQSPSS SNGEAQSRTD 480 RIVFKLFGKE PNDCPLVLRA QILDWLSHSP SDIESYIRPG CIILTIYLRQ SESAWEELCD 540 DMSSSLSRLL DVSDDSFWRS GWTFIRVQHQ IAFVYNGQVI VDTSLPLRSS GHSKIVSVKP 600 IAVPASERAE FLVRGTNLVR PSTRLFCALE GKYLVQEAIH ELMDGVDNLE HDEQCINFSC 660 SIPVTNGRGF VEIEDQGLGS SFFPFIVAEE DVCSEIRVLE SVLECTESNA VVGGIGKIET 720 YNQAVDFIHE MGWLLHRSQL RSRLGDLDPN ADLFPLKRFK WLMEFSVDHD WCAVVRKLLD 780 ILIDGSISTG EDHSLSLTLS EIGLLHRAVR RNSRPLVEVL LKYVPKNLSD KLESQDKAVT 840 DGVNQKLFFR PDVTGPAGLT PLHIAAGKDG SEDVLDALTN DPGLVGIEAW KSARDSTGST 900 PEDYARLRGH YSYIRLIQRK INKRPASGHV VVNIPGDFND CSANQKKNAL ATTFEIGRRE 960 SLRRIQHPCG LCDRKLAYGT ISRSIVYRPA MLSMVAIAAV CVCVALLFKS CPEVVYVFQP 1020 FRWELLEFGT S

Sequence ? help Back to Top

Protein Sequence Length: 1031 aa Download sequence

MEARFGGEAH AHAHPHPHPH PHPHPHHHPH FYGVTSADLS TVGKRTMEWD LNQWKWDPDL  60
FLATSVNPVV VPSDTMAMGR QFFPIGSTAI PDTGGSSNTS SSCSEEGDPA IDKGKRELEK  120
RRRANGVDDH NLNDEAATLT LKLGGSDREM ANWEGNSGKK TKLVGSTSNR AICQVEDCGA  180
DLSAAKDYHR RHKVCEMHSK AGKALVGNVM QRFCQQCSRF HVLQEFDEGK RSCRRRLAGH  240
NKRRRKTNPE TVANGTSLTD DQTSGYLLIS LLRILSNMHS NKSDQTTDQD LLSHLLKSLA  300
SQTSDHGGKG VAALLQEPQN LLNDGTSVGN SEAVSTFLSN GSQGPPRPIK QNHAISISEI  360
PEQGVHLHNA NGGSIQATSS VKPSVLNSPP SYSEARDSTA GQNKMNNFDL NDIYIDSDDG  420
TEDPERSSPP TNLVTSSLDC PSWVQQDSHQ SSPPQTSGNS DSASAQSPSS SNGEAQSRTD  480
RIVFKLFGKE PNDCPLVLRA QILDWLSHSP SDIESYIRPG CIILTIYLRQ SESAWEELCD  540
DMSSSLSRLL DVSDDSFWRS GWTFIRVQHQ IAFVYNGQVI VDTSLPLRSS GHSKIVSVKP  600
IAVPASERAE FLVRGTNLVR PSTRLFCALE GKYLVQEAIH ELMDGVDNLE HDEQCINFSC  660
SIPVTNGRGF VEIEDQGLGS SFFPFIVAEE DVCSEIRVLE SVLECTESNA VVGGIGKIET  720
YNQAVDFIHE MGWLLHRSQL RSRLGDLDPN ADLFPLKRFK WLMEFSVDHD WCAVVRKLLD  780
ILIDGSISTG EDHSLSLTLS EIGLLHRAVR RNSRPLVEVL LKYVPKNLSD KLESQDKAVT  840
DGVNQKLFFR PDVTGPAGLT PLHIAAGKDG SEDVLDALTN DPGLVGIEAW KSARDSTGST  900
PEDYARLRGH YSYIRLIQRK INKRPASGHV VVNIPGDFND CSANQKKNAL ATTFEIGRRE  960
SLRRIQHPCG LCDRKLAYGT ISRSIVYRPA MLSMVAIAAV CVCVALLFKS CPEVVYVFQP  1020
FRWELLEFGT S

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G47070.1	0.0	SBP family protein