PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON88707.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family Dof
Protein Properties Length: 372aa    MW: 39361.3 Da    PI: 8.1276
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON88707.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof123.47.3e-3983143262
      zf-Dof   2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 
                 +e+al+cprCdstntkfCy+nnysl+qPr+fCk+CrryWt+GGalrnvPvGgg+r+nk+++
  PON88707.1  83 PEAALNCPRCDSTNTKFCYFNNYSLTQPRHFCKTCRRYWTRGGALRNVPVGGGCRRNKRTK 143
                 67899*****************************************************975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 372 aa     Download sequence    
MVFSSVPHVY LDPPNWPQQP NHEQQQQQQQ SSGRSDQNPQ LPPPPPLPPT AGGGVGGGGG  60
SGTGSIRPGS MADRARLAKI PQPEAALNCP RCDSTNTKFC YFNNYSLTQP RHFCKTCRRY  120
WTRGGALRNV PVGGGCRRNK RTKGSSRSKS PAPDRQTGSC STSTAAVNSN GGGRGDILGH  180
LPPQPPLPHL PFLPNLHHHL GDYGTAGGDP GDVGLNFVGI PPQVVNTGGG EVEFQIGGSG  240
GGGDGGLGDH QQWRLQQQVH QFPFLAANLE PPTRFYPFDH HHHQGAGENE EPPSYLGGAS  300
QLQSKALDTQ EVAAVKVEGN NIHHQGLNNL SRNFLGGLGL NDHHQYLGGG GGGGGNAWTD  360
LSTFTSSTNH LL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G55370.16e-46Dof family protein