PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PON88661.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
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Family | FAR1 | ||||||||
Protein Properties | Length: 201aa MW: 22914.9 Da PI: 9.8068 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 59.6 | 1e-18 | 41 | 124 | 2 | 90 |
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 fY++YA++ GF +r+ +s+ks+r+g+i++r + C g +e+++k + +++ +r C+a++ +k+e+ g w+v k++ eHnH+l+ PON88661.1 41 FYDDYARQKGFLTRVLSSRKSERDGSIISRGLGCR--GLPESRTKI---QAQKQCRQRDVCTAMILLKRENPGSWVVRKFVGEHNHPLV 124 9*********************************6..666666655...6688899999****************************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 201 aa Download sequence |
MGDGNGAVET YGGESSAHEG GSDIEPNEGM LFQSEEAARA FYDDYARQKG FLTRVLSSRK 60 SERDGSIISR GLGCRGLPES RTKIQAQKQC RQRDVCTAMI LLKRENPGSW VVRKFVGEHN 120 HPLVVQLQKS RRILDDKDKK IQELTSELRV KKRLSAAYRE QLLAIMKDVE EHNGHVSNKV 180 QLVYENLRKL EAKRQEHLRH S |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G43280.1 | 1e-56 | FAR1 family protein |