PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON88659.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family FAR1
Protein Properties Length: 280aa    MW: 31915.3 Da    PI: 8.0678
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON88659.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR185.58.2e-27115203290
        FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 
                 fY+eYA++vGF +r+ + ++s+r+g+i  r++ C+keg+  + + k    r++r++tr gCka+++vk +k+gkw++tk+++eHnH+l+
  PON88659.1 115 FYDEYARQVGFVMRVMSCRRSERDGRILARRLGCNKEGHCVSIRGKFGPVRKPRPSTREGCKAMIHVKYDKSGKWVITKFVKEHNHPLV 203
                 9**************************************99999998****************************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 280 aa     Download sequence    
LGKFFFLYCI GLQSHQPLCP DPPYQTLKHR APTLTLLSGV FEPSTSTTPK SSTEIPVPTH  60
KTTTYLALLE SMDLDEGAGA VESSAGQELV TYEGDANLEP YEGMEFDSED AAKIFYDEYA  120
RQVGFVMRVM SCRRSERDGR ILARRLGCNK EGHCVSIRGK FGPVRKPRPS TREGCKAMIH  180
VKYDKSGKWV ITKFVKEHNH PLVFSPREAR QTMDEKDKKI QELTAELRNK KRLCTTYQEQ  240
LSAFIRIVEE HSNELSKKVQ NVVSNLKEFE PIDQDLSQHR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G43280.11e-110FAR1 family protein