PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | PON88297.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
|
||||||||
Family | NF-YB | ||||||||
Protein Properties | Length: 191aa MW: 21724.5 Da PI: 6.9107 | ||||||||
Description | NF-YB family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YB | 163.9 | 2.2e-51 | 58 | 152 | 3 | 97 |
NF-YB 3 eqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrelegek 97 +++r+lPianv+rimk++lP nakisk+aket+qecvsef+sfvt+easdkc++e+rkt+ngdd++wala lGf+dy+ p+k yl++yrele ++ PON88297.1 58 QEQRLLPIANVGRIMKQILPPNAKISKEAKETMQECVSEFVSFVTGEASDKCRKERRKTVNGDDVCWALAALGFDDYAGPMKRYLHRYRELEIDR 152 5789***************************************************************************************9886 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 191 aa Download sequence |
MYIYTICSSS STMYCSYFFS LQYLIWRTNM VDNNNNITGA AGSSKINGSE GVIKSLDQEQ 60 RLLPIANVGR IMKQILPPNA KISKEAKETM QECVSEFVSF VTGEASDKCR KERRKTVNGD 120 DVCWALAALG FDDYAGPMKR YLHRYRELEI DRAIQEKARS SAQANHNLRL NEDDHHLRRS 180 IDDVNDGTEV I |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT2G47810.1 | 3e-55 | NF-YB family protein |