PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PON87799.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
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Family | ERF | ||||||||
Protein Properties | Length: 220aa MW: 24142.1 Da PI: 8.1279 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 67.2 | 3.2e-21 | 36 | 85 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 +++GVr ++ +gr++AeIrd ++ ++r++lg+f++aeeAa+a++aa+++l+g PON87799.1 36 KFRGVRKRP-WGRFAAEIRDpWK----KTRVWLGTFDSAEEAARAYDAAALSLRG 85 79*******.**********883....5*************************99 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 220 aa Download sequence |
MRRGGGKAID PSAAATSRLR EVEKRIESKS PLPEIKFRGV RKRPWGRFAA EIRDPWKKTR 60 VWLGTFDSAE EAARAYDAAA LSLRGPKAKT NFPSSPRDPI YHHHDERVSS KIDVIQASRP 120 TSSSLSSTVE SFSGPRVSAR PVVAQRPRCR PAVQPAQPDD DDCHSDCDSS SSVVDDCVLT 180 SSFRRILPFD LNLPPPPMDG PDLCDGGYAD DDIQATALCL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G50640.1 | 5e-21 | ERF family protein |