PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON87094.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

GeBP

Protein Properties

Length: 423aa MW: 45746.4 Da PI: 4.6016

Description

GeBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON87094.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF573	115.8	2.4e-36	126	225	1	97
DUF573 1 klfqrlwseeDeivlLqGlidfkaktgk...spsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiW 96 klfqrlw++eDei lLqG++d+++++g + ++d+ fy+++k++++++++k+qlveK+rrLKkK+++ k++sgk++sf+++hdq +fe+s+kiW PON87094.1 126 KLFQRLWTDEDEIGLLQGFLDYTTQRGRtthHGQNDTALFYDQIKSKLQLDFNKNQLVEKLRRLKKKYRNVIGKISSGKDFSFKSPHDQATFEISRKIW 224 579**********************95433345************************************************************** PP DUF573 97 g 97 PON87094.1 225 S 225 6 PP

Sequence ? help Back to Top
Protein Sequence Length: 423 aa Download sequence
MASHQDDVVL PGEEEEDLDS SSQDDDEDDE DDDEEENDDV LADASPSTSS AGADRFRVAV 60 AVAPPSANTV TVALPAAVPN GEPRLTLATA AAATTTVIAD RHRNDAGNDV VSASQEKKPA 120 FDDSRKLFQR LWTDEDEIGL LQGFLDYTTQ RGRTTHHGQN DTALFYDQIK SKLQLDFNKN 180 QLVEKLRRLK KKYRNVIGKI SSGKDFSFKS PHDQATFEIS RKIWSDVGRI GPDDNALEDD 240 DPNPGNPNFN VEVKAEDGAG FVFEKKTPTP RSRKRSRSKP AVGADERRCI NDASPPNKEN 300 HNNSGGGVAN SIVSNNGGNV QGLIEETVKS CLSPLFKELV SSAMAGGGPC AAARGFGGLA 360 LSPMPLSFGG PPPSMGFGGG ELVDERWRKQ QILELEVYSK RLELVQDQIK AALEDLRSRG 420 GGP

Sequence ? help Back to Top

Protein Sequence Length: 423 aa Download sequence

MASHQDDVVL PGEEEEDLDS SSQDDDEDDE DDDEEENDDV LADASPSTSS AGADRFRVAV  60
AVAPPSANTV TVALPAAVPN GEPRLTLATA AAATTTVIAD RHRNDAGNDV VSASQEKKPA  120
FDDSRKLFQR LWTDEDEIGL LQGFLDYTTQ RGRTTHHGQN DTALFYDQIK SKLQLDFNKN  180
QLVEKLRRLK KKYRNVIGKI SSGKDFSFKS PHDQATFEIS RKIWSDVGRI GPDDNALEDD  240
DPNPGNPNFN VEVKAEDGAG FVFEKKTPTP RSRKRSRSKP AVGADERRCI NDASPPNKEN  300
HNNSGGGVAN SIVSNNGGNV QGLIEETVKS CLSPLFKELV SSAMAGGGPC AAARGFGGLA  360
LSPMPLSFGG PPPSMGFGGG ELVDERWRKQ QILELEVYSK RLELVQDQIK AALEDLRSRG  420
GGP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G28040.1	1e-76	GeBP family protein