PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON87092.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

GeBP

Protein Properties

Length: 320aa MW: 36037.8 Da PI: 5.1163

Description

GeBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON87092.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF573	89.4	4.2e-28	100	199	2	97
DUF573 2 lfqrlwseeDeivlLqGlidfkaktgkspsd..didafy.efvkksisfkvsksqlveKirrLKkKfkkkvkk.aksgkepsfskehdqkifelskkiW 96 + +r+w+ eDei lLq ++d++a++ + p++ + fy + +k ++ ++++k+qlveK+rrLK+K++++++k + sg +++f+++h++ ife+s+kiW PON87092.1 100 KKKRVWTAEDEIELLQSFLDYTASRRTGPHQktASNSFYsDRIKPELRLRFNKTQLVEKLRRLKRKYENNSTKmKGSGVDFRFRSPHEKGIFEISQKIW 198 568*******************999888844568999458***************************556899****************** PP DUF573 97 g 97 PON87092.1 199 S 199 6 PP

Sequence ? help Back to Top
Protein Sequence Length: 320 aa Download sequence
MAWPLVRWIM SSSSSPSSSS SFSASEFDDD DDVEFNETED QESPTNDVVS RDQPEYDDDG 60 VDSVTVAVTG TADPSSSTSK RRRTDENYDD AATTVRLAEK KKRVWTAEDE IELLQSFLDY 120 TASRRTGPHQ KTASNSFYSD RIKPELRLRF NKTQLVEKLR RLKRKYENNS TKMKGSGVDF 180 RFRSPHEKGI FEISQKIWSG GGGGSVVDHE DVMDDNTGVA EKSRPRTRSQ TRNSSGGSMR 240 SAKRGVLDCD ESDTTGLVMG LALKPMSFEL KLGEGDEKWR EQQIMELEVY SKRLELVQSR 300 VKAALDKLRS SPTEADVLRT

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	80	103	KRRRTDENYDDAATTVRLAEKKKR
2	81	104	KRRRTDENYDDAATTVRLAEKKKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G28040.1	2e-26	GeBP family protein