PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON87055.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

C2H2

Protein Properties

Length: 313aa MW: 35391.1 Da PI: 7.2885

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON87055.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	17	1.6e-05	138	157	1	20
EEETTTTEEESSHHHHHHHH CS zf-C2H2 1 ykCpdCgksFsrksnLkrHi 20 ++C+ C+k+F+r n++ H+ PON87055.1 138 FSCSVCNKTFNRYNNMQMHM 157 89*****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 313 aa Download sequence
MHTPSTSITS ITSFSYICSN KNTARLEEAD NQEQLGHEDS IFLSLGPPGQ HNNVLKHYEP 60 TFHQISSSSN QPYQNHNQSN KHSSATSTRE KDGVTVALHI GPSDSGLHHI INNNETQTDE 120 AQYWIPSAAQ ILVGPTQFSC SVCNKTFNRY NNMQMHMWGH GSQYRKGPES LRGTKPASSM 180 LRLPCYCCAE GCKNNIEHPR ARPLKDFRTL QTHYKRKHGA KPFGCRKCAK PFAVRGDWRT 240 HEKNCGRLWF CICGSDFKHK RSLKDHVRAF GNGHAPHALE FCEVVGEEGE EDNDDDNDDY 300 EERENDNPGS VVF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G13290.1	1e-120	C2H2 family protein