PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON87046.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

NAC

Protein Properties

Length: 431aa MW: 48730.2 Da PI: 4.6873

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON87046.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	105.6	6.3e-33	58	196	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk......lelee...vikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratk....sgyWka 85 lp+G++F+P+d+e++++ L +kv + + + e +++e +i++v+P++Lp vk++ + +fF+++ k+y+tg+rk+r+++ + +W++ PON87046.1 58 LPRGVKFDPSDQEIIWHLL-AKVGEGDltphpfIA--EfipTVEEDdGICYVHPQKLP-GVKQDGSVSHFFHRAIKAYNTGTRKRRKISdgdcDVRWHK 152 799**********6655.555555546654422..22222444435******.677888899**************9883344456* PP NAM 86 tgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128 tg++k+v+ +g ++g+kk++v+y +r k+ekt+Wvmh+y+l PON87046.1 153 TGRTKPVIL-DGVQKGCKKIMVLYmsVARGGKSEKTNWVMHQYHL 196 *******.99********4434777888*******98 PP

Sequence ? help Back to Top
Protein Sequence Length: 431 aa Download sequence
MAGTSWLVDS NRIATKIKSA SSKYEPERTK WKSNPTRACP SCHYVIDNSE VAQEWPGLPR 60 GVKFDPSDQE IIWHLLAKVG EGDLTPHPFI AEFIPTVEED DGICYVHPQK LPGVKQDGSV 120 SHFFHRAIKA YNTGTRKRRK ISDGDCDVRW HKTGRTKPVI LDGVQKGCKK IMVLYMSVAR 180 GGKSEKTNWV MHQYHLGTEE DEKDGEYVIS KIFYQQHQVK QGEKTDQDVA ESADVVIPKV 240 DPVTPKSLTP DPPRGEWRHS DIDLGTMVTS TDPFAKYADI EYMEDEIIPE CEKTGHDEPK 300 EENQVEEVNN SENNVNCNPE DTKWWDSESQ NLLDSQQLVE GLSLCDDLLQ SQSPNRDGNT 360 HENGQPQNDK PKLADYAQLG PEHLKKDLEE CQNLVLDPAN IELDTPPEFR LSQLDFGSQE 420 SFLAWGGKVC D

Sequence ? help Back to Top

Protein Sequence Length: 431 aa Download sequence

MAGTSWLVDS NRIATKIKSA SSKYEPERTK WKSNPTRACP SCHYVIDNSE VAQEWPGLPR  60
GVKFDPSDQE IIWHLLAKVG EGDLTPHPFI AEFIPTVEED DGICYVHPQK LPGVKQDGSV  120
SHFFHRAIKA YNTGTRKRRK ISDGDCDVRW HKTGRTKPVI LDGVQKGCKK IMVLYMSVAR  180
GGKSEKTNWV MHQYHLGTEE DEKDGEYVIS KIFYQQHQVK QGEKTDQDVA ESADVVIPKV  240
DPVTPKSLTP DPPRGEWRHS DIDLGTMVTS TDPFAKYADI EYMEDEIIPE CEKTGHDEPK  300
EENQVEEVNN SENNVNCNPE DTKWWDSESQ NLLDSQQLVE GLSLCDDLLQ SQSPNRDGNT  360
HENGQPQNDK PKLADYAQLG PEHLKKDLEE CQNLVLDPAN IELDTPPEFR LSQLDFGSQE  420
SFLAWGGKVC D

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G25580.1	1e-168	NAC family protein