PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON86895.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family AP2
Protein Properties Length: 433aa    MW: 47449.1 Da    PI: 9.1917
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON86895.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP254.13.9e-1773132155
         AP2   1 sgykGVrwdkkrgrWvAeIrd.pseng...kr.krfslgkfgtaeeAakaaiaarkkleg 55 
                 s y+GV++++++gr++A+++d  ++n+   k+ k+++lg ++ +e Aa+a++ a++k++g
  PON86895.1  73 SIYRGVTRHRWTGRYEAHLWDkSTWNQnqnKKgKQVYLGAYDDEEAAARAYDLAALKYWG 132
                 57*******************766644468557*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 433 aa     Download sequence    
MASSSSDPGL KPESSAGGGG GGGGGGGESS EAVIANDQLL MYRGLKKAKK ERGCTAKERI  60
SKMPPCAAGK RSSIYRGVTR HRWTGRYEAH LWDKSTWNQN QNKKGKQVYL GAYDDEEAAA  120
RAYDLAALKY WGPGTLINFP VTDYTRDLEE MQNVSREEYL ASLRRKSSGF SRGISKYRGL  180
SSRWEPSFGR MAGSEYFNSI NYGTGDDPAT ESEFVGSICF ERKIDLTNYI KWWGPNKNRQ  240
GEASVKSSEE TKHACAGDIG GELKTLEWAV QPTEPYQMPH LGMSHEGIQH KSSKVSALSI  300
LSRSAAYKSL QEKALKKQES NAENDENKSK NAINKMDYGK AVEKPTSHDG GSERYGVALG  360
MSSGLSLQRN ISMFPLTPLL SAPLLTNYNT IDPLVDPIVW TSLAPVLPSG ISRTAEVTKT  420
ETSSTFTLYR PGE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G41710.11e-168AP2 family protein