PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON86575.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family bHLH
Protein Properties Length: 273aa    MW: 30200.3 Da    PI: 9.8583
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON86575.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH43.17.6e-1476122354
                 HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
         HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                 ++h+++E+rRRdriN  +++Lr+l+Pk+      K++Ka+ L  +++++k+L
  PON86575.1  76 KSHSQAEKRRRDRINAQLATLRKLIPKS-----DKMDKAALLGSVIDHVKDL 122
                 79*************************8.....7****************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 273 aa     Download sequence    
MENLYPQYSS PHPKGDDFSQ HNKASVLRND ESFLVPYWHL PPPTSASAAF QFRGFPSNIP  60
IDGFTAEEDK AAAASKSHSQ AEKRRRDRIN AQLATLRKLI PKSDKMDKAA LLGSVIDHVK  120
DLKRKAGEVG KSSVVPTEVD EIIIDSNLSD QDYIRLTEVG AEKNTRDKVN YIKASVCCDD  180
RPELFSELIQ VLKGLRLTAV RADVSSIGGR IKSVLILSSK NSEDGNTSVC INNLKQSLKL  240
VLSKIASSSS MASNCRIRSK RQRFFLPSSH VSQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40200.12e-40bHLH family protein