PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PON86455.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
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Family | MYB | ||||||||
Protein Properties | Length: 536aa MW: 60937.3 Da PI: 7.0011 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 27.7 | 6.2e-09 | 56 | 85 | 1 | 30 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIart 30 rg WTteEd ll ++v+++ g++Wk I ++ PON86455.1 56 RGGWTTEEDNLLSELVRKYNGKNWKMIGEY 85 789***********************9875 PP | |||||||
2 | Myb_DNA-binding | 55.6 | 1.2e-17 | 153 | 199 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg WTteEd ll ++v+++ g++Wk Ia++++ Rt+ qc +rwqk+l PON86455.1 153 RGGWTTEEDNLLSELVRKYNGKNWKMIAACLP-PRTDVQCLHRWQKVL 199 789*****************************.9***********986 PP | |||||||
3 | Myb_DNA-binding | 56.6 | 5.8e-18 | 205 | 251 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd+ll++ +++G ++W+++a++++ gR +kqc++rw+++l PON86455.1 205 KGSWTEEEDDLLIEQAEKYGYKRWSAVAKCLP-GRIGKQCRERWRNHL 251 799*****************************.*************97 PP | |||||||
4 | Myb_DNA-binding | 50.3 | 5.5e-16 | 257 | 300 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 r++WT+eE+ l+ +++ G++ W+ Iar ++ gRt++ +k++w++ PON86455.1 257 RDAWTEEEESTLAYYHQICGNK-WADIARFLP-GRTENAIKNHWNS 300 789*******************.*********.***********96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 536 aa Download sequence |
MCKRFVEIYN MVQVKEEIED YAVDSDKEIG LIYDSPVLRS TSRLGRKTGP TRRSTRGGWT 60 TEEDNLLSEL VRKYNGKNWK MIGEYDPXLG VLSLICMSSE RFVEIYTMVQ VKEEIEDYTE 120 DSDKEIGLIY DSPVLRSTSR LGRTTGPTRR STRGGWTTEE DNLLSELVRK YNGKNWKMIA 180 ACLPPRTDVQ CLHRWQKVLN PELVKGSWTE EEDDLLIEQA EKYGYKRWSA VAKCLPGRIG 240 KQCRERWRNH LDPTIKRDAW TEEEESTLAY YHQICGNKWA DIARFLPGRT ENAIKNHWNS 300 AKKKVGSQSP DGFYTNISPV AHPEITESPK RLMGFNLELE NLTVTNQTHE PFATSLTLGF 360 DENIGQVEKR GKNQKYPDCP TGTYCDCLAH EPPSSQDVGT SVDLNGFSSA DVRRVPDPNG 420 SYCYTTPTKL SPESILRKSA MTFTNTPSII RKRRHKTLCS SFSDVSCSPT WTISSAHEKD 480 VNSTNFPNSK PAFISTHLCT PQTLVAVKSL GRRLEYAFNE AEDSSALYFP DVGINM |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G02320.2 | 3e-66 | MYB family protein |