PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PON86153.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
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Family | MYB | ||||||||
Protein Properties | Length: 359aa MW: 40265.5 Da PI: 6.1258 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 60.9 | 2.7e-19 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++lv+ ++++G g+W++ +r g++R++k+c++rw +yl PON86153.1 14 KGPWTPEEDQKLVKFIQKHGHGSWRALPRLAGLNRCGKSCRLRWTNYL 61 79********************************************97 PP | |||||||
2 | Myb_DNA-binding | 56.7 | 5.6e-18 | 67 | 112 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++++eE+e +++++ lG++ W++Ia++++ gRt++++k++w+++l PON86153.1 67 RGKFSQEEEETILNLHSILGNK-WSAIASHLP-GRTDNEIKNFWNTHL 112 89********************.*********.************996 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 359 aa Download sequence |
MGRSPCCDES GLKKGPWTPE EDQKLVKFIQ KHGHGSWRAL PRLAGLNRCG KSCRLRWTNY 60 LRPDIKRGKF SQEEEETILN LHSILGNKWS AIASHLPGRT DNEIKNFWNT HLKKKLIQMG 120 IDPMTHRPRT DIFSSLPHLI ALANLKELMD HPWEEHAVRL QAEAVQNMAK LQYLQYLLQP 180 PANLNSINGN QTNNLNNLTT SDMETINLLN SLSSFKDNPA FDSPQFQSLT LQSVDGSIPF 240 AHLPDLKIPC SNRDERPVVL NKQTAVNDND QVQDYAVFNN NQLGQDEMIF SAGLSPWQLP 300 PSECTTPSPP MGAPVAAPET SVSNLQADAC NIINSSYGEV THSVWPDLIL DDTLFQDLA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G34670.1 | 4e-99 | MYB family protein |