PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON86044.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family HD-ZIP
Protein Properties Length: 335aa    MW: 37651.2 Da    PI: 4.3692
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON86044.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox61.71.1e-1995148356
                 --SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
    Homeobox   3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                 k++++t +q++ Le+ Fe ++++  e++ +LAk lgL+ rqV +WFqNrRa++k
  PON86044.1  95 KKRRLTVDQVQFLEKSFEVENKLEPERKVQLAKDLGLQPRQVAIWFQNRRARWK 148
                 56689************************************************9 PP

2HD-ZIP_I/II131.24e-4295184291
  HD-ZIP_I/II   2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreel 91 
                  kkrrl+ +qv++LE+sFe e+kLeperKv+la++Lglqprqva+WFqnrRAR+ktkq+Ekdy++L+++y++lk++ e+L+ke+++L++e+
   PON86044.1  95 KKRRLTVDQVQFLEKSFEVENKLEPERKVQLAKDLGLQPRQVAIWFQNRRARWKTKQMEKDYDVLQASYNSLKADYESLRKETDKLKAEV 184
                  9**************************************************************************************987 PP

Sequence ? help Back to Top
Protein Sequence    Length: 335 aa     Download sequence    
MAGGRVYGGG NGSSSLSVLL QNQRGSSGSE PLDSLFFSGS CNSSTSSSFL GSRSMMSFED  60
FHGGNGSNKS FFRSFGSDEI GLDDDLDEYF HQPGKKRRLT VDQVQFLEKS FEVENKLEPE  120
RKVQLAKDLG LQPRQVAIWF QNRRARWKTK QMEKDYDVLQ ASYNSLKADY ESLRKETDKL  180
KAEVLVLSDE LLKREKEKES NSELSDNSNK LSEEPVEKPL AESASEGEVS KVSTVLCHQE  240
DISSVKSDIF DSDSPRLTDG VHSNPLMEPG DSSYAFEADQ SDLSQDEEDK LISRSFLPSG  300
YVFPKLEDVD YSDPPESSCN FEYPVEDHAF WSWSY
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1310GGRVYGGG
2143151RRARWKTKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G01470.13e-45HD-ZIP family protein