PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON86029.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family MYB_related
Protein Properties Length: 101aa    MW: 11282.5 Da    PI: 9.7507
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON86029.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding25.82.5e-081458345
                     SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHH CS
  Myb_DNA-binding  3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwq 45
                     +WT+   + + +a + + ++   +W  +a+ +g g+t++++k ++ 
       PON86029.1 14 SWTAKQNKAFEKALAVYDKDtpdRWYNVAKAVG-GKTPEEVKRHYE 58
                     6********************************.**********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 101 aa     Download sequence    
MASSSMSSRG SSASWTAKQN KAFEKALAVY DKDTPDRWYN VAKAVGGKTP EEVKRHYELL  60
VEDVKHIESG QVPFPNYRTT GGSSQGNTSD DEKRMRNLKL Q
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G39250.11e-47MYB_related family protein