PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON85400.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

G2-like

Protein Properties

Length: 433aa MW: 48153.8 Da PI: 9.5753

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON85400.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	101.7	4.6e-32	254	307	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 pr+rWt++LH+rFv+ave LGG+e+AtPk++lelm+vk+Ltl+hvkSHLQ+YR+ PON85400.1 254 PRMRWTTTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRT 307 9****************************************************7 PP
2	Myb_DNA-binding	48.3	2.3e-15	255	306	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWTt ++ ++v+av++lGg+ t+k++ + m k +tl ++ks++q+y+ PON85400.1 255 RMRWTTTLHARFVHAVELLGGHeraTPKSVLELMDvKDLTLAHVKSHLQMYR 306 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 433 aa Download sequence
MELFPAQPDL SLQISPPNSK PTSSWRRSST AAATTDEDVD LGFWKRALDS QNFSIVARPD 60 KYNNNNNNNN NTSSSCFSDL SLSNNPRLAS NSSENSHLHP HHHHHHHFLN NGNIGNNLFH 120 MTTSATTSTS TSSTINAFPH HQNQLLLRQN APFQHLLHHH QQQQGGGLGR ELGFLRPIRG 180 IPVYHQNHPP PSSSFPFSQP LETTANSLSS SVNAVNTTTS SSPFQSHHHH HHQAGLMRSR 240 FLSRFPAKRS MRAPRMRWTT TLHARFVHAV ELLGGHERAT PKSVLELMDV KDLTLAHVKS 300 HLQMYRTVKT TDRAAASSGQ SDAYENGSSG DTTEDLMFDI QNTRRSEQSP QQGRSSGQDK 360 EYNNPALWSN SSSREAWLHG KPKDSTGGNI PSLDDQKDMD PNSLSYERIS SDGSSPTNSP 420 KKPNLEFTLG RAL

Sequence ? help Back to Top

Protein Sequence Length: 433 aa Download sequence

MELFPAQPDL SLQISPPNSK PTSSWRRSST AAATTDEDVD LGFWKRALDS QNFSIVARPD  60
KYNNNNNNNN NTSSSCFSDL SLSNNPRLAS NSSENSHLHP HHHHHHHFLN NGNIGNNLFH  120
MTTSATTSTS TSSTINAFPH HQNQLLLRQN APFQHLLHHH QQQQGGGLGR ELGFLRPIRG  180
IPVYHQNHPP PSSSFPFSQP LETTANSLSS SVNAVNTTTS SSPFQSHHHH HHQAGLMRSR  240
FLSRFPAKRS MRAPRMRWTT TLHARFVHAV ELLGGHERAT PKSVLELMDV KDLTLAHVKS  300
HLQMYRTVKT TDRAAASSGQ SDAYENGSSG DTTEDLMFDI QNTRRSEQSP QQGRSSGQDK  360
EYNNPALWSN SSSREAWLHG KPKDSTGGNI PSLDDQKDMD PNSLSYERIS SDGSSPTNSP  420
KKPNLEFTLG RAL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G32240.1	7e-71	G2-like family protein