PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON84730.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

AP2

Protein Properties

Length: 520aa MW: 56992.8 Da PI: 6.2797

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON84730.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	47.5	4.5e-15	237	296	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pse.ng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++gr++A+++d + g ++ ++++lg ++ +e+Aa+a++ a++k++g PON84730.1 237 SIYRGVTRHRWTGRYEAHLWDnSCRrEGqaRKgRQVYLGGYDKEEKAARAYDLAALKYWG 296 57*****************666664478446***********************98 PP
2	AP2	49.8	8.7e-16	339	390	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++grW A+I + +k +lg+f t+eeAa+a++ a+ k++g PON84730.1 339 SIYRGVTRHHQQGRWQARIGRVAG---NKDLYLGTFATEEEAAEAYDIAAIKFRG 390 57**************988532...5**********************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 520 aa Download sequence
MAPATNWLSF SLSPLEMLRS SSDQSPFMAY DSSSTASPQY LLDNFYANGW TNPKSQVFFS 60 EGEGKESQAA SIGDSPILTS FIDPRTQNHH PVPKLEDFLG DSSSSMVRYS DSQTETQDSS 120 LTQIYDQGSA PSYFNDHQQD LKAVTAFQAF STNSGSEVDD SASVPRTAQL TCVEFTGGGG 180 GGAHSIESTG NELGFPSCPT GSLSLGVTTT QSSEKAIVPV DSDPSKKISD TFGQRTSIYR 240 GVTRHRWTGR YEAHLWDNSC RREGQARKGR QVYLGGYDKE EKAARAYDLA ALKYWGPTAT 300 TNFPVSNYTK ELEEMKHVTK QEFIASLRRK SSGFSRGASI YRGVTRHHQQ GRWQARIGRV 360 AGNKDLYLGT FATEEEAAEA YDIAAIKFRG VNAVTNFEMN RYDVEAIAKS ALPVGGAAKR 420 LKLSLEAEEK PSINHDQQAQ CSNSSTTSNN NINFSALQPI STIPCAIPFD AATAALYHQN 480 LFHHFQSNYI GNTDAAGSSP AMTTMIPQPA EFFIWPHQSY

Sequence ? help Back to Top

Protein Sequence Length: 520 aa Download sequence

MAPATNWLSF SLSPLEMLRS SSDQSPFMAY DSSSTASPQY LLDNFYANGW TNPKSQVFFS  60
EGEGKESQAA SIGDSPILTS FIDPRTQNHH PVPKLEDFLG DSSSSMVRYS DSQTETQDSS  120
LTQIYDQGSA PSYFNDHQQD LKAVTAFQAF STNSGSEVDD SASVPRTAQL TCVEFTGGGG  180
GGAHSIESTG NELGFPSCPT GSLSLGVTTT QSSEKAIVPV DSDPSKKISD TFGQRTSIYR  240
GVTRHRWTGR YEAHLWDNSC RREGQARKGR QVYLGGYDKE EKAARAYDLA ALKYWGPTAT  300
TNFPVSNYTK ELEEMKHVTK QEFIASLRRK SSGFSRGASI YRGVTRHHQQ GRWQARIGRV  360
AGNKDLYLGT FATEEEAAEA YDIAAIKFRG VNAVTNFEMN RYDVEAIAKS ALPVGGAAKR  420
LKLSLEAEEK PSINHDQQAQ CSNSSTTSNN NINFSALQPI STIPCAIPFD AATAALYHQN  480
LFHHFQSNYI GNTDAAGSSP AMTTMIPQPA EFFIWPHQSY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G10510.2	0.0	AP2 family protein