PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON84503.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

TALE

Protein Properties

Length: 340aa MW: 38130 Da PI: 5.9849

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON84503.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	26.3	1.2e-08	266	301	20	55
HHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHH CS Homeobox 20 eknrypsaeereeLAkklgLterqVkvWFqNrRake 55 +k +yps++++ LA+ +gL+ +q+ +WF N+R ++ PON84503.1 266 YKWPYPSEAQKLALAETTGLDLKQINNWFINQRKRH 301 5679*****************************885 PP
2	ELK	41	4.1e-14	221	242	1	22
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 ELK qLlrKYsgyLgsLkqEF+ PON84503.1 221 ELKVQLLRKYSGYLGSLKQEFL 242 9********************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 340 aa Download sequence
MDQFGEKSSS TSTSCGVSCS VLMMNNTTNN NMPLPLDAGA GTGNQRVTVA ALNMLPQGSG 60 TNGNYVRHFC NEESSNTTNT CSTMMRAKIM AHPLFPRLLT AYANCQKVGA PPEVVARLEE 120 ACAYNYNNIS RSSSGGCIGE DGGQDPALDQ FMEAYCEMLT KYEQELTKPF KEAMLFLSRV 180 ESQLKTLTLS STTTDSGQNG SSEEEVDVND SFVDPQAEDK ELKVQLLRKY SGYLGSLKQE 240 FLKKKKNGKL PKEARQQLLE WWSRHYKWPY PSEAQKLALA ETTGLDLKQI NNWFINQRKR 300 HWKPSEDMQF VVMDAAHPGH YYMDNIMYNP FSMDCSSTLL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G62360.1	1e-121	TALE family protein