PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PON84420.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
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Family | C3H | ||||||||
Protein Properties | Length: 954aa MW: 105135 Da PI: 6.4017 | ||||||||
Description | C3H family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-CCCH | 18.6 | 3.4e-06 | 527 | 547 | 5 | 26 |
--SGGGGTS--TTTTT-SS-SS CS zf-CCCH 5 lCrffartGtCkyGdrCkFaHg 26 Cr+f+ G C+ Gd+CkF+H+ PON84420.1 527 YCRHFLM-GRCHEGDQCKFSHD 547 6******.*************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 954 aa Download sequence |
MGMAVEEAQI ETVKTSETLM HFPPHTRRHL KSQTYRTLVR ILSRCSDESP PSLPAHNVDH 60 DPKSESGSNE LGQITEKRVA QHVELVCNDS TEPKVSEKVM EVNLNVGDDA FRDRELGEQM 120 AIDQIDQLMI VDENEDLSNQ KEVSGFQDPG FGSELMLINE LENIVKGNEN IFHENNSKPL 180 TVPFVQDRSI IDQVPFSNHQ KEQVDFKQID IDFSGNVSEE VLPSLLNTEV LDAGIVREQK 240 DSELDSVSAV DPNNSIPISE FGKTERREGH SQKSSEDLSF SLGRSTVANA LDAGDKSNDL 300 ISLETNALKV SFKDMELEKP VRYDNVGDSA NHMIGDIDVE EGEISGGYCT DDISMDMPLQ 360 DTGILEGKKV NEEPIADKQE LFCNIASEID FGATFFLIDK SGGGGLRESD KNKTVGTLDI 420 VVNEKALRAS KVDASDDVLE AQKFETNVSH GNDKVVLHGQ SLEEDGTRHH NISREQHDAE 480 VRVKKRSQPS KEKKAKKKQK KRAEKNRQLG VKRLKLPPIS KPKTVSYCRH FLMGRCHEGD 540 QCKFSHDTVP LTKSKPCCHF ARHACMKGDD CPFDHQLSKY PCSNFVSKGF CSRGDSCMFS 600 HKIVPKEDAT ALNAVEPEKK LASLMCNSSK KQLNDSGASW HPFNILSTGI SSHKNTEKNT 660 NETATKQAKM VLKGTRFLSF GSSPLVDSNR LKQQNLSPNR IADAKVGNNI QQHGLGMVQN 720 ANEIPVAPEG TNPTVRAPKG INFLSFGRVR QNDLSSRRLS SSPSSRDSGA KLSPSDNSSM 780 HSQTSSAQDS NLTLNGTQPA VGPKGINFLS FGKSSLDDSC NKERVEFPFN WDNGTGSSGK 840 EKKYPLDEQQ YSSSTPSKLP SSSVSLVQSP DPSSSRIHKD TAQSAQKALL STLAFAAKYE 900 SRMKLNQSIH DPSVGTEIDK EAKSNVMTGS VQNGLEKASR IFELLSSIRN KGKQ |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 493 | 501 | KKAKKKQKK |