PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON84420.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family C3H
Protein Properties Length: 954aa    MW: 105135 Da    PI: 6.4017
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON84420.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH18.63.4e-06527547526
                 --SGGGGTS--TTTTT-SS-SS CS
     zf-CCCH   5 lCrffartGtCkyGdrCkFaHg 26 
                  Cr+f+  G C+ Gd+CkF+H+
  PON84420.1 527 YCRHFLM-GRCHEGDQCKFSHD 547
                 6******.*************7 PP

Sequence ? help Back to Top
Protein Sequence    Length: 954 aa     Download sequence    
MGMAVEEAQI ETVKTSETLM HFPPHTRRHL KSQTYRTLVR ILSRCSDESP PSLPAHNVDH  60
DPKSESGSNE LGQITEKRVA QHVELVCNDS TEPKVSEKVM EVNLNVGDDA FRDRELGEQM  120
AIDQIDQLMI VDENEDLSNQ KEVSGFQDPG FGSELMLINE LENIVKGNEN IFHENNSKPL  180
TVPFVQDRSI IDQVPFSNHQ KEQVDFKQID IDFSGNVSEE VLPSLLNTEV LDAGIVREQK  240
DSELDSVSAV DPNNSIPISE FGKTERREGH SQKSSEDLSF SLGRSTVANA LDAGDKSNDL  300
ISLETNALKV SFKDMELEKP VRYDNVGDSA NHMIGDIDVE EGEISGGYCT DDISMDMPLQ  360
DTGILEGKKV NEEPIADKQE LFCNIASEID FGATFFLIDK SGGGGLRESD KNKTVGTLDI  420
VVNEKALRAS KVDASDDVLE AQKFETNVSH GNDKVVLHGQ SLEEDGTRHH NISREQHDAE  480
VRVKKRSQPS KEKKAKKKQK KRAEKNRQLG VKRLKLPPIS KPKTVSYCRH FLMGRCHEGD  540
QCKFSHDTVP LTKSKPCCHF ARHACMKGDD CPFDHQLSKY PCSNFVSKGF CSRGDSCMFS  600
HKIVPKEDAT ALNAVEPEKK LASLMCNSSK KQLNDSGASW HPFNILSTGI SSHKNTEKNT  660
NETATKQAKM VLKGTRFLSF GSSPLVDSNR LKQQNLSPNR IADAKVGNNI QQHGLGMVQN  720
ANEIPVAPEG TNPTVRAPKG INFLSFGRVR QNDLSSRRLS SSPSSRDSGA KLSPSDNSSM  780
HSQTSSAQDS NLTLNGTQPA VGPKGINFLS FGKSSLDDSC NKERVEFPFN WDNGTGSSGK  840
EKKYPLDEQQ YSSSTPSKLP SSSVSLVQSP DPSSSRIHKD TAQSAQKALL STLAFAAKYE  900
SRMKLNQSIH DPSVGTEIDK EAKSNVMTGS VQNGLEKASR IFELLSSIRN KGKQ
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1493501KKAKKKQKK