PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON84285.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family GeBP
Protein Properties Length: 336aa    MW: 35791.4 Da    PI: 8.6984
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON84285.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF573115.92.3e-36159252198
      DUF573   1 klfqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiWgs 98 
                 klfqrlwse+Deiv+L+G+ d++ak+g++ps+d++af +f+kks++++++k+ql +K+rrLKkKf+++  k    k+ + +k+h++k+felskkiWgs
  PON84285.1 159 KLFQRLWSEDDEIVILKGMTDYAAKKGADPSADMSAFLDFIKKSLQLDFTKTQLADKVRRLKKKFENNDGK----KKYKPTKPHEEKVFELSKKIWGS 252
                 579********************************************************************....88899****************95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 336 aa     Download sequence    
MAPKRSSHLD DPPAASSSEE EEEASSSSSS EEENDKTTPL SSPAPAAENN NPSKAPDSSS  60
GSESDAESSS DSEPADSNVK PIAYKPMEET PKAKKPRSRP TAAAAATSAG RSAKRPGESE  120
AKDSKRAKKK GGGSEPDGGS TPGGGEDESK KSGGDDSKKL FQRLWSEDDE IVILKGMTDY  180
AAKKGADPSA DMSAFLDFIK KSLQLDFTKT QLADKVRRLK KKFENNDGKK KYKPTKPHEE  240
KVFELSKKIW GSEGTSRKPE RRKANGTARS SQKANNNKAA ELLSSPEALN EVKKLDIGLN  300
ASGVSGSLAQ FDKSLGELGL PEHAKLILDA LKSSDH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00390.11e-24GeBP family protein