PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON83701.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

NAC

Protein Properties

Length: 565aa MW: 62966.6 Da PI: 4.7341

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON83701.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	170.5	5.4e-53	14	143	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp..kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkg 97 lp GfrF+Ptdeelv++yL+ k++gk+ e++evi+e+d++k+ePwd+p +++++ ew+fF+++d+ky++g+r nrat++gyWkatgkd++++s ++ PON83701.1 14 LPLGFRFRPTDEELVNFYLRLKINGKDEEVSEVIREIDVCKWEPWDMPdlFLIATRDPEWFFFCPQDRKYPNGHRLNRATNAGYWKATGKDRKIKSGGT 112 699*******************************************5447778889**********************************999 PP NAM 98 elvglkktLvfykgrapkgektdWvmheyrl 128 +++g+kktLvfy+grapkg++t+Wvmheyr+ PON83701.1 113 SEIGMKKTLVFYTGRAPKGKRTNWVMHEYRA 143 9**************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 565 aa Download sequence
MAVGEMAVLS LGSLPLGFRF RPTDEELVNF YLRLKINGKD EEVSEVIREI DVCKWEPWDM 60 PDLFLIATRD PEWFFFCPQD RKYPNGHRLN RATNAGYWKA TGKDRKIKSG GTSEIGMKKT 120 LVFYTGRAPK GKRTNWVMHE YRATLKELDG TKPGQSPFVL CRLFKKQDES VEGSNCEEAE 180 PTESSPNTKF SPEETQSELA LPPEPLPSGE QPEKLSTRVE CTMAETSEET ISEAVATIGI 240 PSNSCNAYDA EDQVKEETTS EVDPQLEEDL KMFYDFPPEP LDCKIFSPLH SQMQAELGSS 300 CGYYPVTSDC SIGHSGVQFQ YGTNEPDDIS QFLSTILNNF GENVSEDLGT ESNSAIDANA 360 MSNVPSNGDA ALQSEAYAQL TGVKFEGGLQ GLSNESYIAN ALPFGSAQSS NHLNSIATDN 420 VGIRIRRRSH PQQNLPSSGL MAQDAAPRRI RLQRKLQISC SFKSVEHQSF RPEDELKPVV 480 KEEEKAVKQH DTGSVDEPQK TALLDFVEDS KTSLEPRVKT RSFPTEKTRE KVSKTSLGGS 540 IWLLSFRVVV IAVLFISFTS LWRCL

Sequence ? help Back to Top

Protein Sequence Length: 565 aa Download sequence

MAVGEMAVLS LGSLPLGFRF RPTDEELVNF YLRLKINGKD EEVSEVIREI DVCKWEPWDM  60
PDLFLIATRD PEWFFFCPQD RKYPNGHRLN RATNAGYWKA TGKDRKIKSG GTSEIGMKKT  120
LVFYTGRAPK GKRTNWVMHE YRATLKELDG TKPGQSPFVL CRLFKKQDES VEGSNCEEAE  180
PTESSPNTKF SPEETQSELA LPPEPLPSGE QPEKLSTRVE CTMAETSEET ISEAVATIGI  240
PSNSCNAYDA EDQVKEETTS EVDPQLEEDL KMFYDFPPEP LDCKIFSPLH SQMQAELGSS  300
CGYYPVTSDC SIGHSGVQFQ YGTNEPDDIS QFLSTILNNF GENVSEDLGT ESNSAIDANA  360
MSNVPSNGDA ALQSEAYAQL TGVKFEGGLQ GLSNESYIAN ALPFGSAQSS NHLNSIATDN  420
VGIRIRRRSH PQQNLPSSGL MAQDAAPRRI RLQRKLQISC SFKSVEHQSF RPEDELKPVV  480
KEEEKAVKQH DTGSVDEPQK TALLDFVEDS KTSLEPRVKT RSFPTEKTRE KVSKTSLGGS  540
IWLLSFRVVV IAVLFISFTS LWRCL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G35580.1	1e-102	NAC family protein