PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON83390.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family bHLH
Protein Properties Length: 344aa    MW: 38709.5 Da    PI: 9.3478
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON83390.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH382.9e-12166213355
                 HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 + h  +Er+RR+++ ++f  L  ++P +     kK++Ka++L  A++Y+k+Lq
  PON83390.1 166 KDHILAERKRREKLSQRFIALSAIVPGL-----KKMDKASVLGDAIKYMKQLQ 213
                 56999***********************.....9******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 344 aa     Download sequence    
MDISSIKGLS ELGMNDPSFI HQWQMNSLDE LSMLPNLATS LGENLHHPHS LSNFNLKASL  60
DNNSHIGIDR SMKHHKPNGW NPNEISQLSN PQVTSSPNLY SFVGSNYTNQ MGLFKPKEEA  120
VHLKSINTLP SDVLISQGCF PNQNYALKAN QGPRRISTST KLSQTKDHIL AERKRREKLS  180
QRFIALSAIV PGLKKMDKAS VLGDAIKYMK QLQEKVKTLE EHTRKKNMES VVFVKKSQLF  240
ADKDNPSSNE NFSGGPFNEP LPEIEARVCD KNVLIRIHCE KKKGVMEKTI AEIEKLHLTV  300
INSSCMTFGS SALDVTIIAQ MDMEFSLTMQ DLVKNLRLAF NLFM
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1172177ERKRRE
2173178RKRREK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37850.11e-63bHLH family protein