PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PON83348.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
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Family | bHLH | ||||||||
Protein Properties | Length: 227aa MW: 25676.9 Da PI: 4.9754 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 31.5 | 3.3e-10 | 78 | 126 | 3 | 54 |
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 ++ rE+ RR+r+N++f L ++l + + +K +K +iL Av+ +++L PON83348.1 78 GTKACREKLRRERLNDRFLDLSSVLEPG---RPTKTDKPAILDDAVRVLNQL 126 57889**********************8...89****************999 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 227 aa Download sequence |
MDSLDDGTCW DLFDYSFTNT PSTDFLWPNQ SVMDIDFLGG GGGNDGNGEV DGDGALQEKE 60 EKEYPRKRGR TDSCSKQGTK ACREKLRRER LNDRFLDLSS VLEPGRPTKT DKPAILDDAV 120 RVLNQLKSEA KELKETNEKL LEEIKSLKAE KNELREEKLV LKADKEKMEQ QLKTMAMSPS 180 GYMPAHPAAY QNKMAVFPGY SLVPMWNYLP PSTRDTSRDH ELRPPAA |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 65 | 71 | PRKRGRT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G14410.2 | 3e-74 | bHLH family protein |