PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PON83004.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 154aa MW: 17802.6 Da PI: 9.9688 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 100.3 | 7.2e-32 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krienk+nrqvtf+kRrng+lKKA+ELSvLCdaev++iifs++gklye++s PON83004.1 9 KRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVSLIIFSNRGKLYEFCS 59 79***********************************************96 PP | |||||||
2 | K-box | 80.6 | 3.6e-27 | 82 | 147 | 9 | 74 |
K-box 9 leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnelll 74 + ++++s++qe+ kLk+++e Lqr+qR+llGedL++L+ keL+qLe+qLe+sl++iRs+K +l+ PON83004.1 82 QPVNDSQSSYQEYLKLKARVEVLQRSQRNLLGEDLGPLNSKELEQLENQLETSLRHIRSTKVTFLF 147 4456789******************************************************99987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 154 aa Download sequence |
MGRGRVELKR IENKINRQVT FAKRRNGLLK KAYELSVLCD AEVSLIIFSN RGKLYEFCSG 60 SSMLKTLEKY QKYSYGALEA SQPVNDSQSS YQEYLKLKAR VEVLQRSQRN LLGEDLGPLN 120 SKELEQLENQ LETSLRHIRS TKVTFLFIAI YIMV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G15800.1 | 4e-78 | MIKC_MADS family protein |