PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON82972.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

WOX

Protein Properties

Length: 409aa MW: 45159.2 Da PI: 8.3183

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON82972.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	54.6	1.9e-17	55	115	2	57
T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 ++R+++++eq+++Le+ F++ +p ++e++++ +l ++ +++V++WFqNr+ + k+ PON82972.1 55 KPRWNPKPEQIRILEAIFNSgMVNPPRDEIRKIRVQLqeygQVGDANVFYWFQNRKSRSKH 115 89***************99***********************************995 PP
2	Wus_type_Homeobox	110.8	7.4e-36	54	116	2	64
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqk 64 +++RW+P+peQi+iLe++++sG+++P+++ei++i+ +L+eyG+++d+NVfyWFQNrk+R+++k PON82972.1 54 PKPRWNPKPEQIRILEAIFNSGMVNPPRDEIRKIRVQLQEYGQVGDANVFYWFQNRKSRSKHK 116 689**********************************************************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 409 aa Download sequence
MASSNRHWPS MFKSKPCNSH HQWQHDINPS LMSSGCHRAP YTSVSGCEER SPEPKPRWNP 60 KPEQIRILEA IFNSGMVNPP RDEIRKIRVQ LQEYGQVGDA NVFYWFQNRK SRSKHKLRHL 120 QSSKQQTPTP PSAATAHVTA PSSSSSSSSE KSSPKASTRP FTVGFSNLVT EANMNNNLNS 180 STSPTASVNQ TIFQTSHEFL AHQPFFFPAV HHQSSATTTT TQGFCFPHSH ELSSGVVLPH 240 EVQNRGPCTS LLLNEIMNHH HHHNHHHHGA SKKDHDRHEK GLMKMDDPDL VNYTRLTPTT 300 PSPVATPNVV VSPHHHHATS GTTTVSAPSV PVNQIQGVGE EVAVGLGGAA KTTVFINDVA 360 FEVATGPFNV REAFGEDAVL IHSYGQPVLT NDWGVTLHSL QHGAFYYLI

Sequence ? help Back to Top

Protein Sequence Length: 409 aa Download sequence

MASSNRHWPS MFKSKPCNSH HQWQHDINPS LMSSGCHRAP YTSVSGCEER SPEPKPRWNP  60
KPEQIRILEA IFNSGMVNPP RDEIRKIRVQ LQEYGQVGDA NVFYWFQNRK SRSKHKLRHL  120
QSSKQQTPTP PSAATAHVTA PSSSSSSSSE KSSPKASTRP FTVGFSNLVT EANMNNNLNS  180
STSPTASVNQ TIFQTSHEFL AHQPFFFPAV HHQSSATTTT TQGFCFPHSH ELSSGVVLPH  240
EVQNRGPCTS LLLNEIMNHH HHHNHHHHGA SKKDHDRHEK GLMKMDDPDL VNYTRLTPTT  300
PSPVATPNVV VSPHHHHATS GTTTVSAPSV PVNQIQGVGE EVAVGLGGAA KTTVFINDVA  360
FEVATGPFNV REAFGEDAVL IHSYGQPVLT NDWGVTLHSL QHGAFYYLI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G33880.1	4e-63	WOX family protein