PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON82967.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family ERF
Protein Properties Length: 273aa    MW: 30736.3 Da    PI: 5.0247
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON82967.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP266.26.5e-21125175255
         AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                 +y+GVr+++ +g+++AeIrd s ng  +r++lg+f+taeeAa a+++a+++++g
  PON82967.1 125 HYRGVRRRP-WGKYAAEIRDSSRNG--ARVWLGTFDTAEEAALAYDKAALRIRG 175
                 8********.**********55465..*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 273 aa     Download sequence    
MSSTRVMAIH KDHQPEAILE NVWASYIGGE GANEGKRLPK SWDELPHLDG REGSMEILQR  60
LPSLGRWISM GAETWEELLD SIIVDPSSNV DHDKDQSSST TNPDKEANSI ERAKKAVVAA  120
VPTKHYRGVR RRPWGKYAAE IRDSSRNGAR VWLGTFDTAE EAALAYDKAA LRIRGPKSYL  180
NFPLETVSKA LGLDYCSEFD SKYCLSSTSA CGNRKRASRE WEEIDHEVMM IEEPAAVRRS  240
KVSSVENRFE NDFDVFEFQD LGSDYLDTLL SSL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G18450.14e-39ERF family protein