PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON82898.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

Protein Properties

Length: 361aa MW: 40538.4 Da PI: 6.8267

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON82898.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	102.8	1.8e-32	72	177	1	99
EEEE-..-HHHHTT-EE--HHH.HTT.........---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.........ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsef 90 f+k ltpsdv+k++rlv+pk++ae++ gg+ ++ l++edesg+ W+++++y+++s++yvltkGW+++vk+++L++gD+v+F++++ ++ PON82898.1 72 FEKPLTPSDVGKLNRLVIPKQHAEKYfplsggdsvGGD--KGLLLSFEDESGKFWRFRYSYWNSSQSYVLTKGWSRYVKEKRLDAGDVVLFERHRADND 168 99**************************99988777..4568********************************************8877999 PP ..EEEEE-S CS B3 91 elvvkvfrk 99 +l+++++r+ PON82898.1 169 RLFIGWRRR 177 9****98 PP

Sequence ? help Back to Top
Protein Sequence Length: 361 aa Download sequence
MDNSPLSSSP HIPEFYHHQV LPSSNIMSRT NSTAFSFNLN QYDNNAEDQN DVVLDERHHP 60 PSEHDEMKEP MFEKPLTPSD VGKLNRLVIP KQHAEKYFPL SGGDSVGGDK GLLLSFEDES 120 GKFWRFRYSY WNSSQSYVLT KGWSRYVKEK RLDAGDVVLF ERHRADNDRL FIGWRRRPAQ 180 DSAAVAAAAA HVSNGGGGGG ESCNSNNNNS NSSNTGWTRM FYSAHPYPTH PHYHHHLHHP 240 AMPYQPDSLH AGYLGGCETL PSLNSKREIN SSIIVLERST VQNPTASVSG NSKILRLFGV 300 NLECHQADNN DDQSEPSTPD GSSLSSQGPA QHHQFYPPTC YSDHMDFTFS RDVKPMRNRR 360 G

Sequence ? help Back to Top

Protein Sequence Length: 361 aa Download sequence

MDNSPLSSSP HIPEFYHHQV LPSSNIMSRT NSTAFSFNLN QYDNNAEDQN DVVLDERHHP  60
PSEHDEMKEP MFEKPLTPSD VGKLNRLVIP KQHAEKYFPL SGGDSVGGDK GLLLSFEDES  120
GKFWRFRYSY WNSSQSYVLT KGWSRYVKEK RLDAGDVVLF ERHRADNDRL FIGWRRRPAQ  180
DSAAVAAAAA HVSNGGGGGG ESCNSNNNNS NSSNTGWTRM FYSAHPYPTH PHYHHHLHHP  240
AMPYQPDSLH AGYLGGCETL PSLNSKREIN SSIIVLERST VQNPTASVSG NSKILRLFGV  300
NLECHQADNN DDQSEPSTPD GSSLSSQGPA QHHQFYPPTC YSDHMDFTFS RDVKPMRNRR  360
G

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G11580.2	4e-60	B3 family protein