PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON82771.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

Trihelix

Protein Properties

Length: 386aa MW: 44499.9 Da PI: 6.7101

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON82771.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	89.4	3.9e-28	74	156	2	86
trihelix 2 WtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 W ++e++ Li++rrem+ ++++k++k+lWe++s kmrergf rsp++C++kw+nl k++kk+k+++k+ s++s +++y+++++ PON82771.1 74 WVQDETRSLIALRREMDGLFNTSKSNKHLWEQISVKMRERGFDRSPTMCTDKWRNLLKEFKKVKHQDKG--SGASAKMSYYKEID 156 ******************************************************************8..789999***998 PP

Sequence ? help Back to Top
Protein Sequence Length: 386 aa Download sequence
MYLSEKPRPI DFYKEEGTPR DMMMEVVSNG ELPQPHNHHQ QQQQQQAHQH QMLLGESSGE 60 DHEVKAPKKR AETWVQDETR SLIALRREMD GLFNTSKSNK HLWEQISVKM RERGFDRSPT 120 MCTDKWRNLL KEFKKVKHQD KGSGASAKMS YYKEIDEILK DRSKNAQYKS PTPPPKVESF 180 MQFSDKGIEE TSISFGPVEA CGRQALNLER RLDHDGHPLA ITTAEAVAAS GVPPWNWRET 240 PGNGGDSQSY GGRVISVKWG DYTRRIGIDG TAEAIKEAIK SAFRLRTKRA FWLEDEDQII 300 RSLDRNMPLG NYTLHVDEGL VIKLCVYDES DHIPAVHTEE KIFYSEDDYR DFLTRRGWTC 360 LREFDGFRNI DNMDDLRPGA MYRGGT

Sequence ? help Back to Top

Protein Sequence Length: 386 aa Download sequence

MYLSEKPRPI DFYKEEGTPR DMMMEVVSNG ELPQPHNHHQ QQQQQQAHQH QMLLGESSGE  60
DHEVKAPKKR AETWVQDETR SLIALRREMD GLFNTSKSNK HLWEQISVKM RERGFDRSPT  120
MCTDKWRNLL KEFKKVKHQD KGSGASAKMS YYKEIDEILK DRSKNAQYKS PTPPPKVESF  180
MQFSDKGIEE TSISFGPVEA CGRQALNLER RLDHDGHPLA ITTAEAVAAS GVPPWNWRET  240
PGNGGDSQSY GGRVISVKWG DYTRRIGIDG TAEAIKEAIK SAFRLRTKRA FWLEDEDQII  300
RSLDRNMPLG NYTLHVDEGL VIKLCVYDES DHIPAVHTEE KIFYSEDDYR DFLTRRGWTC  360
LREFDGFRNI DNMDDLRPGA MYRGGT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G13450.1	0.0	Trihelix family protein