PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON82733.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family Nin-like
Protein Properties Length: 332aa    MW: 38786.8 Da    PI: 10.0201
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON82733.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK83.81.6e-26205254352
      RWP-RK   3 keisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 
                 ++i l+dl+kyF+lpi +A+++L+v+lTvLK++CR++GI+RWPhRkiksl
  PON82733.1 205 ARIALSDLAKYFDLPIVEASRNLKVGLTVLKKKCREFGIPRWPHRKIKSL 254
                 6899********************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 332 aa     Download sequence    
MDSSKTHLLL SLLIFKNTIN RELIRSLHVY RLINGKEKEV EREFVFSANR AYVEMEADPL  60
LILQKFEVSE VFEGFVNGSW LCIFAFYAHR PPPPLLTCIP SLLTLSRNPK LRAIPSLAND  120
LETIFHMICV TDDKEPSRVL SERTCQRNNQ NHRQLRRNVP VLDQDLNCLP YPVTPSELSD  180
DQQIEQSSSG TMEKKKKRAT SKDIARIALS DLAKYFDLPI VEASRNLKVG LTVLKKKCRE  240
FGIPRWPHRK IKSLDSLIRD LQEEREWQQQ DNKAAAMAVA KRQRMLENER ESIEKKPFWE  300
MKTETKRFRQ DVFKRKHRAR VLGTQSLFLP DN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35590.19e-97Nin-like family protein