PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON82722.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family C2H2
Protein Properties Length: 293aa    MW: 28907.2 Da    PI: 9.4343
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON82722.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H215.35.9e-05172193223
                 EETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2   2 kCpdCgksFsrksnLkrHirtH 23 
                 +C+ C + F ++  L  H+r+H
  PON82722.1 172 VCSVCRRDFGSWKALFGHMRSH 193
                 6********************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 293 aa     Download sequence    
MTNSGDPSPN KSPPEKQQPV PPPPPPQTES ETNVVPVALP STGSSTPPVP AADDHHQILG  60
VRQTNVAPIP PLPARPVVRP NILPPLPPPP PRPVVRPNIL PQAAGGGGGV GIGRGGRVIP  120
LVGLGGAGGI QVGGSAEGSG AVHHEVGGEG GAGGRPKRKA AEIVAPAGVA PVCSVCRRDF  180
GSWKALFGHM RSHPNREWRG AFPPPVAQPP AAEGGHGPPA GNQAAASAGS QGSGVAAGRL  240
SIDLNRLQGQ ESSTASASSS SSSKVKDGAS STGFDLNKPP ASDDDTDGGG AAA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35610.11e-09C2H2 family protein