PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON81141.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

AP2

Protein Properties

Length: 400aa MW: 43672.9 Da PI: 5.1168

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON81141.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	39.7	1.2e-12	61	115	3	55
AP2 3 ykGVrwdkkrgrWvAeIrd.pseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 y+GV++++++gr++A+++d s+n+ ++k+ + g ++++e Aa+ ++ a++k++g PON81141.1 61 YRGVTRHRWTGRFEAHLWDkSSWNNvQNKKGRQGAYDSEEAAARTYDLAALKYWG 115 9****************777799988888********************98 PP
2	AP2	51.8	2e-16	158	210	1	56
AP2 1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkklege 56 s+y+GV +++ +grW+A+I + g +k+ +lg++ t eeAa+a++ a+ +++g+ PON81141.1 158 SKYRGVARHHHNGRWEARIGRvF---G-NKYLYLGTYKTQEEAAAAYDMAAIEYRGA 210 89**99******99966...3.6***********************995 PP

Sequence ? help Back to Top
Protein Sequence Length: 400 aa Download sequence
MKRSPSSSCS SSSSSSCAEP HEIPQVESEK PKGKRARKEN GGRENGKIGQ NSASGRRSSM 60 YRGVTRHRWT GRFEAHLWDK SSWNNVQNKK GRQGAYDSEE AAARTYDLAA LKYWGPTTTL 120 NFPIDSYTKE IEEMEKATKE EYLASLRRQS SGFSRGVSKY RGVARHHHNG RWEARIGRVF 180 GNKYLYLGTY KTQEEAAAAY DMAAIEYRGA NAVTNFDISN YIGRIKDKNG QPILIPTAEP 240 EPESPPPPSP PPPEKEESAV SSSENLECHQ LLPCLDSSTM AAVMIDSPVD HELSPWSFLD 300 TGFVHLPVPD LPIEKPGELL DLFDNTGFEE NIDLIFGSGS GSGSGDSSED DFAGVFDKLD 360 NGNGGSGNVE EDVNGGRDQM GSFSSSSPSS SLTATSVSCM

Sequence ? help Back to Top

Protein Sequence Length: 400 aa Download sequence

MKRSPSSSCS SSSSSSCAEP HEIPQVESEK PKGKRARKEN GGRENGKIGQ NSASGRRSSM  60
YRGVTRHRWT GRFEAHLWDK SSWNNVQNKK GRQGAYDSEE AAARTYDLAA LKYWGPTTTL  120
NFPIDSYTKE IEEMEKATKE EYLASLRRQS SGFSRGVSKY RGVARHHHNG RWEARIGRVF  180
GNKYLYLGTY KTQEEAAAAY DMAAIEYRGA NAVTNFDISN YIGRIKDKNG QPILIPTAEP  240
EPESPPPPSP PPPEKEESAV SSSENLECHQ LLPCLDSSTM AAVMIDSPVD HELSPWSFLD  300
TGFVHLPVPD LPIEKPGELL DLFDNTGFEE NIDLIFGSGS GSGSGDSSED DFAGVFDKLD  360
NGNGGSGNVE EDVNGGRDQM GSFSSSSPSS SLTATSVSCM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G54320.3	1e-100	AP2 family protein