PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PON81038.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
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Family | SBP | ||||||||
Protein Properties | Length: 375aa MW: 40133.4 Da PI: 8.903 | ||||||||
Description | SBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SBP | 136 | 1.2e-42 | 77 | 152 | 1 | 76 |
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkk 76 +CqvegC++dls+ak y++rhkvC +hsk+p+v+v++leqrfCqqCsrfh+l efD++krsCrrrLa+hnerrrk+ PON81038.1 77 RCQVEGCNVDLSDAKAYYSRHKVCGTHSKSPKVVVNNLEQRFCQQCSRFHQLPEFDQGKRSCRRRLAGHNERRRKP 152 6*************************************************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 375 aa Download sequence |
MEMGSSSMTE SGGSSSSSPP NSSTESLNGL KFGQKIYFED VGLGAPSKSG AGSSSSSGAT 60 PPKKVRGSPV QSGQPPRCQV EGCNVDLSDA KAYYSRHKVC GTHSKSPKVV VNNLEQRFCQ 120 QCSRFHQLPE FDQGKRSCRR RLAGHNERRR KPPPGSLLSP RYENSSRVGS FLMDFSAYPR 180 LSGRDTWPTA RISERVPGNQ SAIPTGKFLP YPWQSNSDNS SSNLYLQTSA GGTSIPAGHG 240 FPPPPGECIS VVADSSCALS LLSNQPWGSR NRSSSSGLGL HSLMNAQGAP VAEPTTAPHG 300 GTVDHFPTTS WGIKGDMAGS SSHQILPDLG LGQISQPLSG QFPGELELSQ QGRRPYMEPE 360 HSRDFDSSQH MHWSL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G57920.1 | 1e-57 | SBP family protein |