PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON81038.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family SBP
Protein Properties Length: 375aa    MW: 40133.4 Da    PI: 8.903
Description SBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON81038.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SBP1361.2e-4277152176
                 --SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S- CS
         SBP   1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkk 76 
                 +CqvegC++dls+ak y++rhkvC +hsk+p+v+v++leqrfCqqCsrfh+l efD++krsCrrrLa+hnerrrk+
  PON81038.1  77 RCQVEGCNVDLSDAKAYYSRHKVCGTHSKSPKVVVNNLEQRFCQQCSRFHQLPEFDQGKRSCRRRLAGHNERRRKP 152
                 6*************************************************************************97 PP

Sequence ? help Back to Top
Protein Sequence    Length: 375 aa     Download sequence    
MEMGSSSMTE SGGSSSSSPP NSSTESLNGL KFGQKIYFED VGLGAPSKSG AGSSSSSGAT  60
PPKKVRGSPV QSGQPPRCQV EGCNVDLSDA KAYYSRHKVC GTHSKSPKVV VNNLEQRFCQ  120
QCSRFHQLPE FDQGKRSCRR RLAGHNERRR KPPPGSLLSP RYENSSRVGS FLMDFSAYPR  180
LSGRDTWPTA RISERVPGNQ SAIPTGKFLP YPWQSNSDNS SSNLYLQTSA GGTSIPAGHG  240
FPPPPGECIS VVADSSCALS LLSNQPWGSR NRSSSSGLGL HSLMNAQGAP VAEPTTAPHG  300
GTVDHFPTTS WGIKGDMAGS SSHQILPDLG LGQISQPLSG QFPGELELSQ QGRRPYMEPE  360
HSRDFDSSQH MHWSL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G57920.11e-57SBP family protein