PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON80982.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

C2H2

Protein Properties

Length: 302aa MW: 33121.5 Da PI: 6.966

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON80982.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	13.3	0.00025	119	141	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C + F ++ L H++ H PON80982.1 119 FSCNYCQRKFYSSQALGGHQNAH 141 89*****************9988 PP

Sequence ? help Back to Top
Protein Sequence Length: 302 aa Download sequence
MNPPIPIPIP IPERPSYSSE KSSTTTSSSL KLSMEMQKQE DQDHDHQQDN TEVHHGLVLD 60 LSLPKSHSDH GSKPELNFID CFDTANSSKN SSDETSPEHD HEDPDQSGIN INESEPRVFS 120 CNYCQRKFYS SQALGGHQNA HKRERTLAKR GHKVVGAAAF GIPSINSFPY RYSSLASLPL 180 HGSFNRSLGI QVHSMIHKPS FQPNVSSSSS GGTIGSSQLY GHNGWLRLPI GQQPAVGRLE 240 PEVFRGAGEA GGYSSSSSGG PARFEGVRRF SPAGHEEIGG FWWNSSKNKQ DEMQKLDLSL 300 KL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G10970.1	1e-38	C2H2 family protein