PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON80891.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

NAC

Protein Properties

Length: 420aa MW: 47532.1 Da PI: 8.1179

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON80891.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	158.9	2.1e-49	43	168	2	128
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelv 100 +pGfrFhPt+eelv +yL++kvegk++++ e i+ +d+y+++Pw+Lp+ ++ +ekew+f+++rd+ky++g+r+nr+t+sgyWkatg d+ + +++ + + PON80891.1 43 MPGFRFHPTEEELVEFYLRRKVEGKRFNV-ELITFLDLYRYDPWELPALAAIGEKEWFFYVPRDRKYRNGDRPNRVTTSGYWKATGADRMIRTENFRSI 140 79*************************.89***********8778899***************************************** PP NAM 101 glkktLvfykgrapkgektdWvmheyrl 128 glkktLvfy+g+apkg +t+W+m+eyrl PON80891.1 141 GLKKTLVFYSGKAPKGIRTSWIMNEYRL 168 ************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 420 aa Download sequence
MAIAATSSST TTASNMSQEN ESSNNVVNKA NDEDDNHEHD VVMPGFRFHP TEEELVEFYL 60 RRKVEGKRFN VELITFLDLY RYDPWELPAL AAIGEKEWFF YVPRDRKYRN GDRPNRVTTS 120 GYWKATGADR MIRTENFRSI GLKKTLVFYS GKAPKGIRTS WIMNEYRLPQ HETERYQKAE 180 ISLCRVYKRA GVEDHPSLPR SIPSRASSSS RAVHLADRKH PTNAIEKLQA FGGQAPLPAP 240 MPQRQQFEPE NMNETEGSSS SDVAGGNVRG VSKRKTSYHN TSMAPIGATI VQPAAASVEE 300 QVMLSSQQAK QITCPVVPIT CATLFSTGSS SVPPSNPIDD LHKLVNYQHH QQQYYHEHQQ 360 ANQFHPLQLP PPQTQSQQAP LPPAAFNALP NYLPTAFSDR LWEWNPFPEA NRDYSNNPFK

Sequence ? help Back to Top

Protein Sequence Length: 420 aa Download sequence

MAIAATSSST TTASNMSQEN ESSNNVVNKA NDEDDNHEHD VVMPGFRFHP TEEELVEFYL  60
RRKVEGKRFN VELITFLDLY RYDPWELPAL AAIGEKEWFF YVPRDRKYRN GDRPNRVTTS  120
GYWKATGADR MIRTENFRSI GLKKTLVFYS GKAPKGIRTS WIMNEYRLPQ HETERYQKAE  180
ISLCRVYKRA GVEDHPSLPR SIPSRASSSS RAVHLADRKH PTNAIEKLQA FGGQAPLPAP  240
MPQRQQFEPE NMNETEGSSS SDVAGGNVRG VSKRKTSYHN TSMAPIGATI VQPAAASVEE  300
QVMLSSQQAK QITCPVVPIT CATLFSTGSS SVPPSNPIDD LHKLVNYQHH QQQYYHEHQQ  360
ANQFHPLQLP PPQTQSQQAP LPPAAFNALP NYLPTAFSDR LWEWNPFPEA NRDYSNNPFK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G02450.1	1e-105	NAC family protein