PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON80834.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

C2H2

Protein Properties

Length: 431aa MW: 47544.6 Da PI: 9.927

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON80834.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	14.8	8.2e-05	198	220	2	23
EETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 2 kCpdCgksFsrksnLkrHirt.H 23 +Cp Cg+ F +nL+ H+ + H PON80834.1 198 SCPECGEIFMKAENLELHQAVrH 220 8******************9888 PP

Sequence ? help Back to Top
Protein Sequence Length: 431 aa Download sequence
MAKSKNQKKP TKQTHHKSQK LESQKAEKPP SWAVVRGLLT CKHSQTQQQE QQKQQPQQNQ 60 KQKPKQKLKQ KQEQAMEETV KKSKKMKCSG SLCSNTKVMH RPETGSPELQ KKRASMGSTL 120 TNNEASNRSS SMKAPLHELN GVVSTSSSSL SVSSNSSVGG SFRGMPFRRF SGCYECRMVV 180 DPVLGFTRDP SLRGSICSCP ECGEIFMKAE NLELHQAVRH AVSELGPEDT SKNIVEIIFQ 240 SSWLKKQTPI CKIDRILKVH NTQKTITKFE EYRDAIKAKA TKLPKKHPRC IADGNELLRF 300 HCATFMCSLG LNGSSNLCNS IPQCNVCSII KNGFRVAGEP TGEVAGNGIL TTATSGRAHD 360 NAGVAPENGG EKRAMLVCRV IAGRVKKNME GSMEEYDSVA GEVGVYSNLD ELYVFNPKAI 420 LPCFVVIYTG F

Sequence ? help Back to Top

Protein Sequence Length: 431 aa Download sequence

MAKSKNQKKP TKQTHHKSQK LESQKAEKPP SWAVVRGLLT CKHSQTQQQE QQKQQPQQNQ  60
KQKPKQKLKQ KQEQAMEETV KKSKKMKCSG SLCSNTKVMH RPETGSPELQ KKRASMGSTL  120
TNNEASNRSS SMKAPLHELN GVVSTSSSSL SVSSNSSVGG SFRGMPFRRF SGCYECRMVV  180
DPVLGFTRDP SLRGSICSCP ECGEIFMKAE NLELHQAVRH AVSELGPEDT SKNIVEIIFQ  240
SSWLKKQTPI CKIDRILKVH NTQKTITKFE EYRDAIKAKA TKLPKKHPRC IADGNELLRF  300
HCATFMCSLG LNGSSNLCNS IPQCNVCSII KNGFRVAGEP TGEVAGNGIL TTATSGRAHD  360
NAGVAPENGG EKRAMLVCRV IAGRVKKNME GSMEEYDSVA GEVGVYSNLD ELYVFNPKAI  420
LPCFVVIYTG F

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G75710.1	1e-105	C2H2 family protein