PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON80406.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

NAC

Protein Properties

Length: 440aa MW: 50249.1 Da PI: 8.3067

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON80406.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	157	8.1e-49	19	148	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk...k 96 lppGfrFhP+d+el+v+yL++kv++++l++ ++i+e+d+yk++Pw+Lpkk+ +e+ew+fFs+rd+ky++g+r+nra+ gyWkatg dk+++++ PON80406.1 19 LPPGFRFHPSDQELIVHYLQNKVTSRPLPA-SFIPEIDLYKYNPWELPKKAVFGEEEWFFFSPRDRKYPKGERPNRAAGLGYWKATGIDKPIFNSssgL 116 79**************************.89***********8888899***********************************96655 PP NAM 97 gelvglkktLvfykgrapkgektdWvmheyrl 128 ++++g+kk Lvfy gr +kgektdW+m+eyrl PON80406.1 117 SKAIGVKKGLVFYIGRPQKGEKTDWFMNEYRL 148 667*************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 440 aa Download sequence
MERQTSSSST NTTSSNLQLP PGFRFHPSDQ ELIVHYLQNK VTSRPLPASF IPEIDLYKYN 60 PWELPKKAVF GEEEWFFFSP RDRKYPKGER PNRAAGLGYW KATGIDKPIF NSSSGLSKAI 120 GVKKGLVFYI GRPQKGEKTD WFMNEYRLLD SSIKSPRLKR SMRVSGLRTL IREHIRVSCH 180 KLLCTIWICY IASTSCLTLT PYVSVPSPKL RRVEILFRLA NIISEGTTTT TDCVPEKLDD 240 WVLCRVRFKG KLPKKTHEIQ HGHTTEASRC LPEPEQTSFA GANRDKLITD YIHKDCILLA 300 WILSGQPVNP METIPRADFE ESNNIGNNLN YFYEDGSNRV NYQIVTSTDN CCNLLNGETS 360 EKNEKEIIDN KMSCEDNLGR ESLAGTGIWG YIQNQSPDDM YNLTNELPLT DTCSNEANSR 420 PKHNGLTERE ELRRKKCCVN

Sequence ? help Back to Top

Protein Sequence Length: 440 aa Download sequence

MERQTSSSST NTTSSNLQLP PGFRFHPSDQ ELIVHYLQNK VTSRPLPASF IPEIDLYKYN  60
PWELPKKAVF GEEEWFFFSP RDRKYPKGER PNRAAGLGYW KATGIDKPIF NSSSGLSKAI  120
GVKKGLVFYI GRPQKGEKTD WFMNEYRLLD SSIKSPRLKR SMRVSGLRTL IREHIRVSCH  180
KLLCTIWICY IASTSCLTLT PYVSVPSPKL RRVEILFRLA NIISEGTTTT TDCVPEKLDD  240
WVLCRVRFKG KLPKKTHEIQ HGHTTEASRC LPEPEQTSFA GANRDKLITD YIHKDCILLA  300
WILSGQPVNP METIPRADFE ESNNIGNNLN YFYEDGSNRV NYQIVTSTDN CCNLLNGETS  360
EKNEKEIIDN KMSCEDNLGR ESLAGTGIWG YIQNQSPDDM YNLTNELPLT DTCSNEANSR  420
PKHNGLTERE ELRRKKCCVN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G61110.1	2e-63	NAC family protein