PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON79893.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

NAC

Protein Properties

Length: 293aa MW: 33723.1 Da PI: 6.9487

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON79893.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	165.4	2.1e-51	9	133	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgel 99 lppGfrFhPtdeelv++yL +k+++ ++ + +ike+d+yk++Pw+Lp+++ +ekewyfFs+rd+ky++g+r+nra+ +gyWkatg dk++ + ++ PON79893.1 9 LPPGFRFHPTDEELVNHYLIRKCSSLPIAV-PIIKEIDLYKFDPWQLPEMALYGEKEWYFFSPRDRKYPNGSRPNRAAGAGYWKATGADKPIGK--PKA 104 79***********************999.88***********7666789*********************************98..778 PP NAM 100 vglkktLvfykgrapkgektdWvmheyrl 128 g+kk Lvfy g+ap+g+kt+W+mheyrl PON79893.1 105 LGIKKALVFYAGKAPRGVKTNWIMHEYRL 133 *************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 293 aa Download sequence
MTSSGELVLP PGFRFHPTDE ELVNHYLIRK CSSLPIAVPI IKEIDLYKFD PWQLPEMALY 60 GEKEWYFFSP RDRKYPNGSR PNRAAGAGYW KATGADKPIG KPKALGIKKA LVFYAGKAPR 120 GVKTNWIMHE YRLANVDRSA GKKNNNSRLD DWVLCRIYNK KGSIEKSFPI TSQMKIEEFP 180 EIEDRKPHII ASAFPNDHHL YMDTSDSVPK LHTDSSCSEH VLSPEVTCER EVQSQPKWNN 240 NNTYNDGGLE NAFDFNFNYM DGFSEDPFGS QFQYQMDQLS PLQDMFSFLQ KPF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G01720.1	1e-130	NAC family protein