PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON78682.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family B3
Protein Properties Length: 214aa    MW: 24233.3 Da    PI: 6.0387
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON78682.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B351.91.4e-1615106199
                 EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
          B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 
                 ffk+ + +  l+++ l++p+kf+ ++g  ++ s  + ++ + g +W++kl  +k ++ ++l kGW + +k   Lk g +++F+++g+sef  + ++f++
  PON78682.1  15 FFKIVLEET-LQENKLRIPRKFVVNYG--ETLSDSVFVKLPCGSKWKMKL--TKEDNNVWLDKGWADLAKHYALKRGSMLIFRYEGNSEF--NATIFDT 106
                 566665555.55556********9999..458889***************..**********************************9999..7777775 PP
Sequence ? help Back to Top
Protein Sequence    Length: 214 aa     Download sequence    
MSTNQPTVSS GTPHFFKIVL EETLQENKLR IPRKFVVNYG ETLSDSVFVK LPCGSKWKMK  60
LTKEDNNVWL DKGWADLAKH YALKRGSMLI FRYEGNSEFN ATIFDTSTVE IDYPSRPVDF  120
DKFDVGLELQ AHEEEVSEDD SLEILNKFPP CPSAREKSPL PFSHPHKRNR ASPTSNTQSN  180
SAGPNDYVLE NSMSKGKLQS SKPEMIGMEN LLLS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.12e-28B3 family protein