PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON78474.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

Nin-like

Protein Properties

Length: 640aa MW: 70825.5 Da PI: 6.8281

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON78474.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	90.4	1.4e-28	348	398	2	52
RWP-RK 2 ekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 ek+isl +l++yF++++kdAAk++gvc+T+LKriCRq+GI RWP+Rkik++ PON78474.1 348 EKTISLPVLRQYFAGSLKDAAKSIGVCPTTLKRICRQHGITRWPSRKIKKV 398 799**********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 640 aa Download sequence
MPITLQAVDL RSSQNFSPPA VKVCDELYQA ALSEIVEVLV SVCKIHRLPL ALTWAPCHQQ 60 GKGGCRHSDE NYARCVSTVD SACLVSDLEI LGFHEACSEH HLFRGQGIVG IAFTTNKPCF 120 ANNITAFSKT EYPLSHHARM FGLRAAVAIP LRIVYTGSSD FVLEFFLPKD CQDPEEQKQM 180 LNSLSIVIQQ ACRSLHVVVE KELEEEQFML PVGDPTIVAS SEGGLKRGTT TTTATTNTTT 240 CPVGDQSSGK ESSWVSHMME AQQQGRGVSV SLDYLTEEPK EEFRVTTHWD NLNHGDLSNG 300 QVFSDFGQLQ QCSGSKGSME GGIDSYSFGG RRSSGARKAG EKRRTKTEKT ISLPVLRQYF 360 AGSLKDAAKS IGVCPTTLKR ICRQHGITRW PSRKIKKVGH SLRKLQLVID SVQGAEGAIQ 420 IGSFCSSFPQ LNSQGNSNDS FSSISPSDHH HHHHHHHLNN QSNSQPESGF FIHGSAMKSS 480 PSMSSQASGL QQSTTFSGFN GDPLITEDHS VILNRACSSD GELFASNQDE ANLLSRSQSY 540 KALSDQNRIL DQTLPPLPDN NERINSRDGF AFRVKANFGE KKIRFSLPPN CSFRDLQLEI 600 MRRFALDDIT MIDIKYLDDD REWVLLTCNA DLQECLEIHR

Sequence ? help Back to Top

Protein Sequence Length: 640 aa Download sequence

MPITLQAVDL RSSQNFSPPA VKVCDELYQA ALSEIVEVLV SVCKIHRLPL ALTWAPCHQQ  60
GKGGCRHSDE NYARCVSTVD SACLVSDLEI LGFHEACSEH HLFRGQGIVG IAFTTNKPCF  120
ANNITAFSKT EYPLSHHARM FGLRAAVAIP LRIVYTGSSD FVLEFFLPKD CQDPEEQKQM  180
LNSLSIVIQQ ACRSLHVVVE KELEEEQFML PVGDPTIVAS SEGGLKRGTT TTTATTNTTT  240
CPVGDQSSGK ESSWVSHMME AQQQGRGVSV SLDYLTEEPK EEFRVTTHWD NLNHGDLSNG  300
QVFSDFGQLQ QCSGSKGSME GGIDSYSFGG RRSSGARKAG EKRRTKTEKT ISLPVLRQYF  360
AGSLKDAAKS IGVCPTTLKR ICRQHGITRW PSRKIKKVGH SLRKLQLVID SVQGAEGAIQ  420
IGSFCSSFPQ LNSQGNSNDS FSSISPSDHH HHHHHHHLNN QSNSQPESGF FIHGSAMKSS  480
PSMSSQASGL QQSTTFSGFN GDPLITEDHS VILNRACSSD GELFASNQDE ANLLSRSQSY  540
KALSDQNRIL DQTLPPLPDN NERINSRDGF AFRVKANFGE KKIRFSLPPN CSFRDLQLEI  600
MRRFALDDIT MIDIKYLDDD REWVLLTCNA DLQECLEIHR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G35270.1	1e-140	Nin-like family protein