PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON77402.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

TALE

Protein Properties

Length: 685aa MW: 74464.6 Da PI: 6.3506

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON77402.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	28.3	2.9e-09	424	461	19	54
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe ++yp+ +++ LA+++gLt +qV++WF N R + PON77402.1 424 FEHflHPYPKDSDKIMLARQTGLTRSQVSNWFINARVR 461 664459******************************88 PP
2	BELL	127.8	3.8e-41	286	357	1	72
BELL 1 erqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 e+q+lq+k +kLls+l+eVd+rYkqy++q+q+v+ssF+a+ag+gsakpYt+lAl++iSrhFrcL daia+qi PON77402.1 286 EKQDLQNKLTKLLSMLDEVDRRYKQYYHQMQIVVSSFDAIAGCGSAKPYTALALQTISRHFRCLHDAIAGQI 357 6899*******************************************************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 685 aa Download sequence
MATYYSSSNN QRDTAPMLYS REHLTSSYPE ASVLPSNMMM YMNSGSYSDA LAANSQQQSN 60 CMEMPPMGPS DSAPQPQDIL SNLGGSRMGE HDFSEWREGK NDLVVTHSMG GAPSILHGGQ 120 NLQGQGLSLS LGTQIPSGMH MPSISFRNPN MGFASFLSPN PSVSGEGGGR NGSSRDEQPR 180 NVEYLAPGFP GGVNQDSSKG ELSPYGLSSI ARTVPSSKYL KAAQQLLDEV VNVRKALKRN 240 DSEKAQGAQE QGMKSPKEGD DGSKNESTPG GGESASNSQP ELSHAEKQDL QNKLTKLLSM 300 LDEVDRRYKQ YYHQMQIVVS SFDAIAGCGS AKPYTALALQ TISRHFRCLH DAIAGQIKAT 360 RKSLGEQDAS GNVKGVGISR LRFVDQQLRQ QRALQQLGMM QQHAWRPQRG LPESSVSILR 420 AWLFEHFLHP YPKDSDKIML ARQTGLTRSQ VSNWFINARV RLWKPMVEEM YKEETGDAEM 480 DSNSSSENAA KATKGDTRTS EDRGGDLQQS ASSTGTERCS TGQFMDSKVN HVPDVEMAGS 540 VGSATFHNLT RREAEAEYGL MKQQRREEQR PGMDDCSSLF PDAIVQSDGS SERFMAAAAA 600 YHMSELGRFG GGTGVSLTLG LQHCDGGSIP MSSGTHHSFV AMRGDDLYNA AASSVGAETA 660 DFECVNSGNQ QPRFASSHLL HDFVV

Sequence ? help Back to Top

Protein Sequence Length: 685 aa Download sequence

MATYYSSSNN QRDTAPMLYS REHLTSSYPE ASVLPSNMMM YMNSGSYSDA LAANSQQQSN  60
CMEMPPMGPS DSAPQPQDIL SNLGGSRMGE HDFSEWREGK NDLVVTHSMG GAPSILHGGQ  120
NLQGQGLSLS LGTQIPSGMH MPSISFRNPN MGFASFLSPN PSVSGEGGGR NGSSRDEQPR  180
NVEYLAPGFP GGVNQDSSKG ELSPYGLSSI ARTVPSSKYL KAAQQLLDEV VNVRKALKRN  240
DSEKAQGAQE QGMKSPKEGD DGSKNESTPG GGESASNSQP ELSHAEKQDL QNKLTKLLSM  300
LDEVDRRYKQ YYHQMQIVVS SFDAIAGCGS AKPYTALALQ TISRHFRCLH DAIAGQIKAT  360
RKSLGEQDAS GNVKGVGISR LRFVDQQLRQ QRALQQLGMM QQHAWRPQRG LPESSVSILR  420
AWLFEHFLHP YPKDSDKIML ARQTGLTRSQ VSNWFINARV RLWKPMVEEM YKEETGDAEM  480
DSNSSSENAA KATKGDTRTS EDRGGDLQQS ASSTGTERCS TGQFMDSKVN HVPDVEMAGS  540
VGSATFHNLT RREAEAEYGL MKQQRREEQR PGMDDCSSLF PDAIVQSDGS SERFMAAAAA  600
YHMSELGRFG GGTGVSLTLG LQHCDGGSIP MSSGTHHSFV AMRGDDLYNA AASSVGAETA  660
DFECVNSGNQ QPRFASSHLL HDFVV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G34610.2	1e-117	TALE family protein