PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PON76762.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
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Family | bHLH | ||||||||
Protein Properties | Length: 566aa MW: 60698.6 Da PI: 5.3813 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 27.2 | 7.1e-09 | 382 | 430 | 3 | 55 |
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ L++l+P + sk Ka +L + ++Y++sLq PON76762.1 382 NSHSLAERVRREKISERMKFLQDLVPGC----SKVTGKAVMLDEIINYVQSLQ 430 58*************************9....556*****************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 566 aa Download sequence |
MDMGEKDKFE LDNKNEDAMN YSPGMSSDWR FDGSNLTNTS MGFVTAGNSM AIGKGDVIGS 60 SACSSASMVD SFVPTMWDHP SNPQNLGFCD MNVQNNASTL NALGIRKGSP ASLRTGIDRT 120 LDMCWNQSGP MLKGAMFLPN MPGMLPQSLS QLPTDSAFIE RAARFSCFNG GNFSDTVNPF 180 AIPESMSLYS RGGGMMQGVQ DVLAGSGLKP VLSGVHSQKG ELNVSEASKD ASLTVEHGAS 240 EGSPLKNERS ENLAKSHDEA KQFVGGSGNE SDEAEFSNGA GGGQEEPSMI EGAGGEPSAK 300 VHSSKKRKRN GQDSDPDQAK GASQQHGEST KDNTEQHQKG DQNPSTTNNK TTAKHGKQGS 360 QGSDPPKEEY IHVRARRGQA TNSHSLAERV RREKISERMK FLQDLVPGCS KVTGKAVMLD 420 EIINYVQSLQ RQVEFLSMKL ATVNPRLDFN IEGLLAKDML QSRVGSSSSL AFSPDMPMPY 480 PTLQPPQQGL IQAGLSGMGG SSDVLRRAIS SQLMPLAGGY KEPSQLPNVW EDELNNVVQM 540 SFGTRTPPNS QDVDGSLPTG QMKVEL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G68920.3 | 1e-133 | bHLH family protein |