PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON76105.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family WRKY
Protein Properties Length: 311aa    MW: 34192.6 Da    PI: 4.6839
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON76105.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY103.11.5e-32123179258
                 --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS CS
        WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnh 58 
                 dDgy+WrKYGqK++k+s++prsYY+Ct ++C++kk+vers++dp++++itYeg H h
  PON76105.1 123 DDGYKWRKYGQKSIKNSPNPRSYYKCTNPRCNAKKQVERSSDDPDTLIITYEGLHLH 179
                 8******************************************************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 311 aa     Download sequence    
MEEDTIIGSS GAWSSSDGSE EELVRELLDD VSPFFLIQEE STELIQTSSP QNEQLSHCGR  60
FNPAAVYSGP TIEDIENALS VTSRNIQPQQ LSPARMSILE RGLSKIENKY TLKIKSSGNG  120
MTDDGYKWRK YGQKSIKNSP NPRSYYKCTN PRCNAKKQVE RSSDDPDTLI ITYEGLHLHF  180
TYPFFILGQN PDSSPATKKP KKSASSLAAQ EDDPQQAQET EESPHVLDPT GLDTISASMG  240
YVQEPAQEER GSQGLLQDVV PLMILNPSTN NTSSHSSCSS NHSPPTSPSS LSWPPNYYTS  300
CFGIGINSSS R
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G43290.12e-52WRKY family protein