PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON75822.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

bHLH

Protein Properties

Length: 724aa MW: 77385.7 Da PI: 6.175

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON75822.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	50.7	3.3e-16	464	510	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 hn ErrRRdriN+++ L+el+P++ K++Ka++L +A+eY+k Lq PON75822.1 464 VHNLSERRRRDRINEKMRALQELIPNC-----NKVDKASMLDEAIEYLKTLQ 510 6***********************8.....6****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 724 aa Download sequence
MPLSELYRLA KRRVDSNQDF EPGNDVFELV WENGQITTQG QSSRTRKEPT CNSLPSHCLP 60 SYTPKSRDKD IGNGTSSKTG KFGTVDSVVL NEIPMSVPSD EVGLSHDDDM MPWLNYPIDG 120 SLQHEYCPDF LPELSGVTVN DVSKSNNFAS NDKSSCNLLY RESNTNSVGY GASLEQRNGS 180 KIGSVVGGDV VRPRTGSGQL YPSSSQECQT SFPSFRSRVV DSIVDNTSSA ARHSVCSDSV 240 RVPSDGGFPS LKMQKKDPIP PSNSSNVINF SHFSRPAALV KANLQNIGTT TDSHVSSMER 300 IPIKDKGSAA NSNSPPKPVL IDSSNGLRKE TGTHCQIMPT GNDLKPSEAR PLEEPCAAKD 360 SEAVCQEDGA KNDINFNQIP CESATRALPD GEKNMEPVVA SSSVCSGNSV ERASDDPTHV 420 LKRKFRDTED SECHSEDVEE ESVGVKKTAL PRGAGSKRSR AAEVHNLSER RRRDRINEKM 480 RALQELIPNC NKVDKASMLD EAIEYLKTLQ LQVQIMSMGA GLCMPPMMLP AGMQHMHAPH 540 LAHFSPMGVG MGMGLGMGFG MGIPDMNGGS SGYPMIQVPP VPGAHFPGPP MPGHSAALHG 600 MTGPNLQVFG LPGQGLSLPM QRAPLVPVLG GSFMKSAMGL NACGAGGLME NMESARPYTS 660 KDPVQNMGTQ VVQNTGASSS MNQTSSQCQP ANEGFEQSAL VQNNVRTSDV NGGKASANGN 720 EVGA

Sequence ? help Back to Top

Protein Sequence Length: 724 aa Download sequence

MPLSELYRLA KRRVDSNQDF EPGNDVFELV WENGQITTQG QSSRTRKEPT CNSLPSHCLP  60
SYTPKSRDKD IGNGTSSKTG KFGTVDSVVL NEIPMSVPSD EVGLSHDDDM MPWLNYPIDG  120
SLQHEYCPDF LPELSGVTVN DVSKSNNFAS NDKSSCNLLY RESNTNSVGY GASLEQRNGS  180
KIGSVVGGDV VRPRTGSGQL YPSSSQECQT SFPSFRSRVV DSIVDNTSSA ARHSVCSDSV  240
RVPSDGGFPS LKMQKKDPIP PSNSSNVINF SHFSRPAALV KANLQNIGTT TDSHVSSMER  300
IPIKDKGSAA NSNSPPKPVL IDSSNGLRKE TGTHCQIMPT GNDLKPSEAR PLEEPCAAKD  360
SEAVCQEDGA KNDINFNQIP CESATRALPD GEKNMEPVVA SSSVCSGNSV ERASDDPTHV  420
LKRKFRDTED SECHSEDVEE ESVGVKKTAL PRGAGSKRSR AAEVHNLSER RRRDRINEKM  480
RALQELIPNC NKVDKASMLD EAIEYLKTLQ LQVQIMSMGA GLCMPPMMLP AGMQHMHAPH  540
LAHFSPMGVG MGMGLGMGFG MGIPDMNGGS SGYPMIQVPP VPGAHFPGPP MPGHSAALHG  600
MTGPNLQVFG LPGQGLSLPM QRAPLVPVLG GSFMKSAMGL NACGAGGLME NMESARPYTS  660
KDPVQNMGTQ VVQNTGASSS MNQTSSQCQP ANEGFEQSAL VQNNVRTSDV NGGKASANGN  720
EVGA

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	469	474	ERRRRD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G09530.2	7e-74	bHLH family protein