PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON75816.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family C2H2
Protein Properties Length: 302aa    MW: 35199.1 Da    PI: 6.5331
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON75816.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H2120.00065161185123
                 EEETTTTEEESSHHHHHHHHHH..T CS
     zf-C2H2   1 ykCpdCgksFsrksnLkrHirt..H 23 
                 + C  C+k ++  ++++ H+++  H
  PON75816.1 161 FYCDLCNKQYKLAMEFEAHLSSydH 185
                 78*****************987555 PP
Sequence ? help Back to Top
Protein Sequence    Length: 302 aa     Download sequence    
MDHRRFNGRQ ETSTRDKRYH EKEQAYQESL IEDLAEEFRL PINQRPTENV DLDNVEQASL  60
DTQLSSSNVG YRLLQKMGWK GKGLGKDEQG IVEPIRTGIR DAKLGVGKQE EDDYFTSEEN  120
IQRKKLDVEL EETEEHAKKR EVLAEREHKI QTEVNEIRKV FYCDLCNKQY KLAMEFEAHL  180
SSYDHNHRKR FKEMREMHGT SSRDDRQKRE QQRQEREMAK FAQMADARKQ QQLQQQQEES  240
EPAQVSSELK IASVLADQDQ RKTLKFGFSS KGGTSKMSFG SAVKKPKSTV ASVFGNDSDD  300
EK