PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON74849.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

SBP

Protein Properties

Length: 184aa MW: 20826.4 Da PI: 10.1191

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON74849.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	133	9.7e-42	61	138	1	78
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 +Cq+e+C++dls+ak+yhrrhkvCe h+ka+vvlvsg++qrfCqqCsrfhelsefD+++rsCrrrLa+hnerrrk+++ PON74849.1 61 CCQAEKCTVDLSDAKQYHRRHKVCELHAKAQVVLVSGIRQRFCQQCSRFHELSEFDDTRRSCRRRLAGHNERRRKSST 138 6**************************************************************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 184 aa Download sequence
MDLGKTERNK RMVSGKEKMV LKEEEEDEGS EQEDKRKKGA LGSGKKGSGS GGGGLSGGMR 60 CCQAEKCTVD LSDAKQYHRR HKVCELHAKA QVVLVSGIRQ RFCQQCSRFH ELSEFDDTRR 120 SCRRRLAGHN ERRRKSSTES HPEGSSRKGA RTQLKDMVCG QVDDRGRIQI TVQENATYKH 180 FQIR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G53160.1	6e-47	SBP family protein