PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON72446.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

ARR-B

Protein Properties

Length: 387aa MW: 43810.3 Da PI: 4.5491

Description

ARR-B family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON72446.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	50.5	4.4e-16	126	183	1	55
G2-like 1 kprlrWtpeLHerFveaveq.LGGsekAtPktilelmkvkg..LtlehvkSHLQkYRl 55 kpr +Wt+e H F++av++ + s++ +Pk+i e m+ g +t+e+v+SHLQk+Rl PON72446.1 126 KPRFVWTTEVHGIFLNAVAEvMAESDRPVPKKIQEKMQNMGvnVTRENVASHLQKFRL 183 79**************87257789********9984469**********8 PP
2	Response_reg	27.5	1.6e-10	1	51	14	63
HHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHH CS Response_reg 14 lrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellk 63 ++++l + gy +v++++ +eeal ll + d +D+++ + mp+mdG++ll+ PON72446.1 1 MENMLHSCGY-NVTTCQRAEEALSLLYKDDrrYDILISEVHMPDMDGFKLLE 51 57899999.***********666667***************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 387 aa Download sequence
MENMLHSCGY NVTTCQRAEE ALSLLYKDDR RYDILISEVH MPDMDGFKLL EITKDVKFIF 60 KHVIRKKRET ELKEIDPLKI VEEVNINVSN NTTANEGDGK ILKRAIRNHE FEGEPLYDLM 120 TTKEKKPRFV WTTEVHGIFL NAVAEVMAES DRPVPKKIQE KMQNMGVNVT RENVASHLQK 180 FRLNRNKKTN LIQSTPELIK PYPVEGECKH VNALPSDPSH HNLITNVGVD SPTLLGNLVV 240 NIDETLHEGH VVANYESPDL SDPPFEARIQ MIDDTTMNQP FNNMLSPQFS YEIQVQALQD 300 NVAVITSMEP NAYTSLDYSP GQDCAIEDNI GTAPMEIDDP ISLFNTNDIN DNNFSIEYAG 360 LNVGYENPAE TNAYVLQGSE LAKTNEL

Sequence ? help Back to Top

Protein Sequence Length: 387 aa Download sequence

MENMLHSCGY NVTTCQRAEE ALSLLYKDDR RYDILISEVH MPDMDGFKLL EITKDVKFIF  60
KHVIRKKRET ELKEIDPLKI VEEVNINVSN NTTANEGDGK ILKRAIRNHE FEGEPLYDLM  120
TTKEKKPRFV WTTEVHGIFL NAVAEVMAES DRPVPKKIQE KMQNMGVNVT RENVASHLQK  180
FRLNRNKKTN LIQSTPELIK PYPVEGECKH VNALPSDPSH HNLITNVGVD SPTLLGNLVV  240
NIDETLHEGH VVANYESPDL SDPPFEARIQ MIDDTTMNQP FNNMLSPQFS YEIQVQALQD  300
NVAVITSMEP NAYTSLDYSP GQDCAIEDNI GTAPMEIDDP ISLFNTNDIN DNNFSIEYAG  360
LNVGYENPAE TNAYVLQGSE LAKTNEL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G16110.1	2e-30	ARR-B family protein