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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
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| TF ID | PON70051.1 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
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| Family | HD-ZIP | ||||||||
| Protein Properties | Length: 297aa MW: 34016.8 Da PI: 5.7489 | ||||||||
| Description | HD-ZIP family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
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| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | Homeobox | 62.4 | 6.7e-20 | 63 | 115 | 4 | 56 |
-SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
Homeobox 4 RttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
++++ ++q+++Le++Fe ++++ e++++LA++lgL+ rqV +WFqNrRa++k
PON70051.1 63 KRRLGTDQVKALEKYFEVENKLEPERKAKLADELGLQPRQVAIWFQNRRARWK 115
4567899*********************************************9 PP
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| 2 | HD-ZIP_I/II | 127.9 | 4.2e-41 | 62 | 153 | 2 | 93 |
HD-ZIP_I/II 2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93
kkrrl ++qvk+LE+ Fe e+kLeperK++la eLglqprqva+WFqnrRAR+ktkq+Ekdy+ Lk++yd+lk + e+L++++e+Lr+++k+
PON70051.1 62 KKRRLGTDQVKALEKYFEVENKLEPERKAKLADELGLQPRQVAIWFQNRRARWKTKQMEKDYSLLKANYDSLKLSYEALQQQNEALRKQVKQ 153
9****************************************************************************************997 PP
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| Sequence ? help Back to Top |
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| Protein Sequence Length: 297 aa Download sequence |
MKRFGSSDSL GALISICAPK DATIVNAEEK CAETNHQGYS KEFQAMLDSL DQEDCSEEFT 60 GKKRRLGTDQ VKALEKYFEV ENKLEPERKA KLADELGLQP RQVAIWFQNR RARWKTKQME 120 KDYSLLKANY DSLKLSYEAL QQQNEALRKQ VKQLKAKMCR EIEESSQSMK EESPFSGHES 180 NALDHTRENK AEFHETYGNY AKSKDGSSDS DSINGVTKED HGKPEFSLGP KGLSSSSSNS 240 MKNWIQISDN YSRAFSVKIC QPQFMRMEDQ TPFSSDESCN FFSVDQAPTL HWYFPEQ |
| Nucleic Localization Signal ? help Back to Top | |||
|---|---|---|---|
| No. | Start | End | Sequence |
| 1 | 62 | 91 | KKRRLGTDQVKALEKYFEVENKLEPERKAK |
| 2 | 110 | 118 | RRARWKTKQ |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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| Hit ID | E-value | Description | ||||
| AT4G40060.1 | 1e-54 | HD-ZIP family protein | ||||
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for Bioinformatics, Peking University Last Modified: 2022-12-08 Questions or Comments, please contact  |
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