PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON69676.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

TCP

Protein Properties

Length: 263aa MW: 29557.2 Da PI: 10.8469

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON69676.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	92.7	7.6e-29	68	153	3	83
TCP 3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt............ssssaseceaesssssas 83 g+kdrhsk++T +g+RdRR+Rls+++a++++dLqd+LG+ ++sk i+WL+ + k i++l+ + ++++ ++ PON69676.1 68 GGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDRLGLSQPSKVIDWLIDATKNDIDKLPPLqipqgslllsqfH-------NHHTTTLATT 153 78*************************************************************3333333332220.......2222222222 PP

Sequence ? help Back to Top
Protein Sequence Length: 263 aa Download sequence
MITNSREKAG FPAAKQEARD GGGGGGGGGG EQQLFKAPTS TTTSSSSRQW SSAGFRNPRI 60 VRVSRTFGGK DRHSKVCTIR GLRDRRIRLS VPTAIQLYDL QDRLGLSQPS KVIDWLIDAT 120 KNDIDKLPPL QIPQGSLLLS QFHNHHTTTL ATTFENKDHL HDHQDGINQL FAQSFFPLSS 180 NPLSHPNSLQ NGMSYEPSND NLLSLSXXEV VVVVVAMDSP YPKWIVMLIR RRFRLLSYLD 240 LSYSSVFLIR RRRFTIHILL RII

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G60970.1	1e-49	TCP family protein